Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2803 ATGGAATCAATAAACCGATCCTTAGACGAATTTTACTCTCCCCACGCACGCGAATCGCTCGACGAATTGTCTGAGCACTTCACAATCACCGACCCTTCCATTTCAGGTCACCCTATAGTCTTCGCCAGCCACGCGTTTCTCAAGATGACTGGCTTCACGCGCGATGAAGTTGTTGGTAGAAGTGGTGCCATGTTTCAAGGTCCAGCGACGTGTCGTAGGGCGGTGATGGAAATTCGTGAAGCTGTTAGGGAAGAAAGAGAGGTTCAAGTTGTTTTGGTTAATTATCGTAAAAACGGCACGCCGTTTTGGGTTTTGTTGAATGTTTCTCCTGTTTTTAGTGCGAACCGTGGTGCTGTTGTTCATTTTGTTGCTGTTCAGGTTCCGCTGCGTAGGAAACCGAGGGTTTGTGGTTCTGGTGGTGGGTTTTCTCAGGTGAATGAGTTTGTGTTCCGGTGTTGTCGGAAGGAAGTTTGTTCTGATTCTTTGGCTGAACTTAGTCGTGTTTCTTCCGCAAATCGAGTGTTGGAACATGATGTCTCGGAATTGGAGAGTGAAGAGCCACGTGAGGCAAGTGGTGATGAGAGGAGAAGTGCTGCGACGGCCATGGACAACATCTTTTCTGTGCTAACCCACTATAGTGAGTTGACGGGAAAATTGGTGTGTAGAAAGAGATGCAGCATTCCTGACGTGGGTCTTCTTAGCTCTTCCTTGATTATTTCTCTTGGTAGAATCAAACAAAGCTTTGTATTTTTCCTCGCAGAACTAATCCACATTTGCCAGACATGCCTATTGTTTATGCCAGTGACGCCTTCATGA 816 0.4657 MESINRSLDEFYSPHARESLDELSEHFTITDPSISGHPIVFASHAFLKMTGFTRDEVVGRSGAMFQGPATCRRAVMEIREAVREEREVQVVLVNYRKNGTPFWVLLNVSPVFSANRGAVVHFVAVQVPLRRKPRVCGSGGGFSQVNEFVFRCCRKEVCSDSLAELSRVSSANRVLEHDVSELESEEPREASGDERRSAATAMDNIFSVLTHYSELTGKLVCRKRCSIPDVGLLSSSLIISLGRIKQSFVFFLAELIHICQTCLLFMPVTPS* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2803 271 TIGRFAM sensory_box: PAS domain S-box protein 39 120 IPR000014 -
Psa2g2803 271 PANTHER PROTEIN TWIN LOV 1-LIKE 4 254 - -
Psa2g2803 271 ProSiteProfiles PAS repeat profile. 35 85 IPR000014 -
Psa2g2803 271 Pfam PAS domain 37 126 IPR000014 -
Psa2g2803 271 SUPERFAMILY PYP-like sensor domain (PAS domain) 27 125 IPR035965 -
Psa2g2803 271 CDD PAS 39 117 IPR000014 -
Psa2g2803 271 Coils Coil 165 185 - -
Psa2g2803 271 Gene3D PAS domain 26 220 - -
Psa2g2803 271 PANTHER PROTEIN TWIN LOV 1 4 254 - -
Psa2g2803 271 SMART pac_2 89 132 IPR001610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2803 Psa-Chr2 325485980 325490268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2803 13 131 AGC Kinase Gene Family AT5G58140 36.134 8.73e-21 90.1