Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2788 GTTGCATTGGATGCTTGGTCTTCTTGCAGGGTGCTCATGGATTGATGCTTGCTTGCTATGGCTTTTTGCAGCTTGATGGAATTGGATTGAAATTATTTCAACTTGCGAGTTTGTGTTCCGTTGTTCTTTGTTGTCGAGTTGCTCCTCTGCAAAAAGCCGGTATTGTTTCCCTTGTGAAGAAGAGAACATCTGACATGACACTAGCCATTGGAGACGGTGCTAATGATGTTTCAATGATTCAAATGGCTGATGTCGGAGTCGGCATCAGTGGACAAGAGGGCAGGCAAGCTGTAATGTCATCAGATTTCGCAATGGGACAGTTTAGGTTTTTAGTTCCTCTCTTGTTGGTTCATGGTCACTGGAATTACCAAAGGCTTGGTTACATGATTCTATACAATTTCTACAGAAATGCTGTCCTTGTTCTTGTCCTATTTTCTATAACTGTTCTGTACTTACGTGCTGAAGCCGGGGCTTCTGCCGGTGGTGGTACTAGACGGATGGCTGCACAATCTGGGGGTGATGAATTTTCGATGCAAATCCCAAACAATAAGGTCGGCCTTATAATTGGTAAAGGAGGAGAAACAATTAAGAGTATGCAAGCTTCTACTGGAGCACGGATTCAGATTACTTTTAATGTTAAACACCAATTGCGAATGGAAGATCGAATTTGGATCCAACTCCAATCCGGCTCAGAATTCCGGTGCGGTGGATTTTCAGAGAATCGCAGAGTCATCACTGCGGTGGTTACGTGGCGAAGTGGTCACGCGAGAGGGAAGTGA 779 0.4454 CIGCLVFLQGAHGLMLACYGFLQLDGIGLKLFQLASLCSVVLCCRVAPLQKAGIVSLVKKRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVPLLLVHGHWNYQRLGYMILYNFYRNAVLVLVLFSITVLYLRAEAGASAGGGTRRMAAQSGGDEFSMQIPNNKVGLIIGKGGETIKSMQASTGARIQITFNVKHQLRMEDRIWIQLQSGSEFRCGGFSENRRVITAVVTWRSGHARGK* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2788 258 Gene3D - 18 109 IPR023214 -
Psa2g2788 258 Gene3D K Homology domain, type 1 165 243 IPR036612 GO:0003723
Psa2g2788 258 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 30 150 - -
Psa2g2788 258 SMART kh_6 171 221 IPR004087 GO:0003676
Psa2g2788 258 Pfam Phospholipid-translocating P-type ATPase C-terminal 97 146 IPR032630 -
Psa2g2788 258 Pfam haloacid dehalogenase-like hydrolase 61 87 - -
Psa2g2788 258 ProSiteProfiles Type-1 KH domain profile. 172 208 - -
Psa2g2788 258 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 39 151 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa2g2788 258 SUPERFAMILY HAD-like 30 117 IPR036412 -
Psa2g2788 258 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 30 150 - -
Psa2g2788 258 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 169 209 IPR036612 GO:0003723
Psa2g2788 258 CDD KH-I 174 225 - -
Psa2g2788 258 Pfam KH domain 176 222 IPR004088 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2788 Psa-Chr2 323639055 323641476 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2788 31 144 Primary Pumps ATPases AT5G04930 89.474 2.96e-66 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2788 K14802 - gmx:100813836 220.705