Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2785 ATGGGGAAAGGAAGAAGTCCTGGGAAATGGATTAAGAACTTGTTCTCAGGGAAGAAATCATCGTCCAAGTCTAGTTCATCGAAGAATAATGATATTTTTAAATCTTTGAGTAACAAGGATACTTTGGGGATTTCTGAGTTAACTGTGTCTAATCCAATTCCAACTGTGGATTCTTTGCTAATATCACCGCCGATATCTGGAGCTAATGTTGCCAAAGGATTGTTTTCGGAAAAGGAAGTAGTTACTAGGTCATCTCATGAGAGGGATATTGTATCAAATGGAGGGGAAGAGGCTCAGGGATCGCCTGTTGCTAATTTTGCAGCTCAAGTTGATCTTGAGACACTCACGCTTACAGATGCAGCTATTAAACTTCAGGCTGCTTGTAGAGGCTATCGGGCTCGCTGGGAATTTCAAACACAAAAAGCTATCACACAGCTGCAAGCTCTTATTCGTGGTCACTTGGTTAGAAGACAAGCTGTTTCTGCATTATATTGTGTGAAGAGAATCGTTAAAGTCCAAGCGTTGGCTCGTGGTTACAATGTTAGGCGTTCTGATATTGGGCTTGAAGTCCTGAAAATTCGTAAGGATACTCAATGTTCAAAATCTATTGGCTCAGTTACATCCACAGAGGCAGAGAAGTTGCCCGATAATGTCTTTGTTCATAAGCTGCTGGCTTCATCGTCCCATGCTTTTCCTCTATCTATCAGAAGCGATTTTGGAGAACCTTACTTGGCTGAAAACTGGCTTGACCGATGGACTAGGTCACACTTTTGGGCACCTCTTCCTAAATTAAAGAAGAAACATGATTTGGCATCTGTTGAAAAAAATATCAGTTCTCAAACAGTTGAAAAGGGACAAGTTAAAAGGAATACTCGGAAATCTCCTACTGTGAAAGCCAATGATGGCTCAACTTCAGGTTCTAACAAACAGAAACAAGGTCTAAAAAAGGATTCAAATCACTCATTGGTTTCAGCTCAGGAACACGAACACCCAAGGAAAGAAATTGAGAAAGGCAGTATAAAAAAAACTCGCATGCAGAATGTTTCAGACAGATCTGAGATTGTTAGCGAGAAAAGAAAACACAGCATTAGGACAATTTCAGATCACACTGTTACTGATGTCTCAGATCACACTGAGAAAATGAAAGTGATAACAGTGCCTAAGTCTGAAGAGTCTTATCCTGAGAAAGCAGTAGAAGAGAACAATGGTAAGCCGACGAAGAGCTTAAATGGAGGTGTCAAAGAAGAGAAAGGTCTTGGACAGAAAGCAGTAGAAGAGAATAATGATAAGCCAAAAAAGAGCTTAAATAGCAGTGCCATAGAACAGAAAGGTCTTGGACAGAAAGCACTAGAAGATAATAATGAAAAGCCAAAAAAGAGCTTAAATGGTGGGGCGAAAGAACAGAAAGCACTAGAAGAGAAAGGTCATAATGATCCTACTGCTGTTTTACAGACTAGTGTGAAGAATGTAGGAGATGTTAAAATAGGAGTTAGTGAAGACCTAAATGGCGGTGACAAAATTATCAGCAACAATTGCCAAAGAAGAGCGTCACTACCTGCTAATTTTAACGATCAAGAAAATGAGTTACATAACACTCCAAGACTGCCGAGTTATATGGCTCCTACTGAATCAGCAAAAGCTAGGCTAAGGGGACAAGGCTCCCCTAGATTCGCTACCGATTTTCTAGACAAAAACAGTTTGACCAGGAGGCATTCACTTTCATCCTCGTTTAACAGCAAGTCAGGTTCATTTTCCCCACGAGCAGAAAAGCTGGTAAGTTTGAGCAGCAGAGGAGTTGCGAGGACTGATAAATCTCTGTCATCTTCAAGGGATGGGACTGATAAGTTGACACAACCTCAGTGGAGAAGGTGA 1872 0.4087 MGKGRSPGKWIKNLFSGKKSSSKSSSSKNNDIFKSLSNKDTLGISELTVSNPIPTVDSLLISPPISGANVAKGLFSEKEVVTRSSHERDIVSNGGEEAQGSPVANFAAQVDLETLTLTDAAIKLQAACRGYRARWEFQTQKAITQLQALIRGHLVRRQAVSALYCVKRIVKVQALARGYNVRRSDIGLEVLKIRKDTQCSKSIGSVTSTEAEKLPDNVFVHKLLASSSHAFPLSIRSDFGEPYLAENWLDRWTRSHFWAPLPKLKKKHDLASVEKNISSQTVEKGQVKRNTRKSPTVKANDGSTSGSNKQKQGLKKDSNHSLVSAQEHEHPRKEIEKGSIKKTRMQNVSDRSEIVSEKRKHSIRTISDHTVTDVSDHTEKMKVITVPKSEESYPEKAVEENNGKPTKSLNGGVKEEKGLGQKAVEENNDKPKKSLNSSAIEQKGLGQKALEDNNEKPKKSLNGGAKEQKALEEKGHNDPTAVLQTSVKNVGDVKIGVSEDLNGGDKIISNNCQRRASLPANFNDQENELHNTPRLPSYMAPTESAKARLRGQGSPRFATDFLDKNSLTRRHSLSSSFNSKSGSFSPRAEKLVSLSSRGVARTDKSLSSSRDGTDKLTQPQWRR* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2785 623 MobiDBLite consensus disorder prediction 275 489 - -
Psa2g2785 623 MobiDBLite consensus disorder prediction 292 312 - -
Psa2g2785 623 MobiDBLite consensus disorder prediction 598 623 - -
Psa2g2785 623 Pfam Protein of unknown function (DUF4005) 525 597 IPR025064 -
Psa2g2785 623 Gene3D - 116 163 - -
Psa2g2785 623 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Psa2g2785 623 MobiDBLite consensus disorder prediction 548 623 - -
Psa2g2785 623 MobiDBLite consensus disorder prediction 418 432 - -
Psa2g2785 623 Pfam IQ calmodulin-binding motif 141 158 IPR000048 GO:0005515
Psa2g2785 623 Pfam IQ calmodulin-binding motif 167 183 IPR000048 GO:0005515
Psa2g2785 623 Pfam IQ calmodulin-binding motif 118 134 IPR000048 GO:0005515
Psa2g2785 623 MobiDBLite consensus disorder prediction 448 476 - -
Psa2g2785 623 MobiDBLite consensus disorder prediction 15 29 - -
Psa2g2785 623 ProSiteProfiles IQ motif profile. 139 168 IPR000048 GO:0005515
Psa2g2785 623 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 620 - -
Psa2g2785 623 MobiDBLite consensus disorder prediction 313 386 - -
Psa2g2785 623 PANTHER IQ-DOMAIN 5-RELATED 1 620 - -
Psa2g2785 623 MobiDBLite consensus disorder prediction 568 590 - -
Psa2g2785 623 MobiDBLite consensus disorder prediction 1 29 - -
Psa2g2785 623 SMART iq_5 116 138 IPR000048 GO:0005515
Psa2g2785 623 SMART iq_5 139 160 IPR000048 GO:0005515
Psa2g2785 623 SMART iq_5 164 186 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2785 Psa-Chr2 323131245 323135662 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2785 4 623 IQD Protein Family AT1G14380 31.554 6.22e-68 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2785 - - aprc:113869184 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2785 2 323131245 323135662 Psa2g2785 2 323131245 323135662 ECH
Psa2g2785 2 323131245 323135662 Psa4g1221 4 86240084 86246430 ECH