Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2774 ATGGAACCTGCTTTGGGAATTTTTAGTATTCCATCAAATTCTTTTGTGAAGACTTGTGTTATTTGCAAGCAAATTCACGGTTCCTGCACACAGTGCTACAAATGCTCCACTTATTTCCATGCCATGTGTGCATCAAGGGCTGAGCTCCAAATCGCATTGTTCCTGGATATCCTGCAGTATGTGAGGCAGGTGTTCACCTCTTGTGCTGATGTGCTGGGAAAGAAGCAGTTTTGTTACATACTTGCACGCCATGGAATCACTTTTAAGCTTGACGAGGAAATGGTTAATGATGATGAAGACCGAGAAGTGTTGCAGGATATCATAAATAATTCTAAGTTAAGTGAAGGATATCTTACTCTTGCTCGTGATGTTGAAGTCATGGAGCCCAAGTCTAATAATTCTAAGTTAAGTGAAGGATATCTTACTCTTGCTCGTGATGTTGAAGTCATGGAGCCCAAGTCCCCTGAAGATATATACAAGGCACATTTGCTTGATGGTCGTGCAAGTGCTGGTGCGAGTGCTGACTCAGCTAGACAGAACCTTGCTGCTACTTTTGTTAATGCTTTTGTTAATGCTGGGTTTGGTCAGGATAAGCTAATGACCGTTGCATCAGATTCTTCAAGTAGTGGTTCTTCTGGAAATTGGCTTTCCAAAAACAAGGAACATGGGAAGACTAGTGTTGCAGCAAGTCTGGGTATGATTTTACTCTGGGATGTTGACTCTAGACTTGCACAACTTGACAAATACTTCCACAGTAATGATAACCATGTCATTACTGGTGCATTACTGGGAGTTGGAATTGTCAATTGTAGTATCAAGAATGACTGTGATCCTGCAATGGCACTTCTTGGTGATTATATAGATAAAGAAGATAGTTCGACCAGAATTGGTGCAATTATGGGATTAGGAATTGCATATGCAGGTTCCAAGAATGAGCAGCTACGATACAAGTTGGCACCTATTCTGAGTGATCCTAAAGCTTCACTTGATGTGATTGCTTTCACGGTAATTGCATTGGGCTTGGTCTATGTGGGTTCTTGCAATGAGGAAGTTGCTCAAGCAATCATATTTACATTGATGGACCGGAGTGAGTCAGAGTTAGGAGAGCCCCTTACACGGCTACTACCACTCGGCCTTGGTGAAATGCACCAAGGTCCGACAGTTCTTGGAATTGTTATGGTAGCAATGGCTGAAGAATTAGATGTTGAGATGGCTATTCGATCGTTAGAGCATCTTCTACAGTATGGAGAGAAGAATATTCGCCGAGCAGTTTCTCTGGCACTTGGTCTGTTGTGTATATCAAATCCAAAGGTCAATGTTATGGATACCTTAAGCAGACTTAGCCATGATACTGATTCAGAAGTAACAATGGCAACTGTTATCTCCTTGGGTCTAATAGGCGCTGGAACAAACAATGCTCAGCGCTGGGTGCCTCGATTGCCAGATGCGTATAATCTTCTCCAGAGCATGGTAGCTCTCGGCCTAAGGCCTTCTTTGCAGACATATACTTTCGAAGAGTCGACAACATGTCTACGTGTTAGTGTCATACTTATGGGATTTTGTTCTGAGCTAATGGAAGTCAGTGGCCAAACCTACCAATTCACAATGCAACACTGCATTAAGTATCAGACCAAATCCAAAACCTGTTTTCTTCTAGCAATTCAAAAATTCACCTTTGACCTCACCGAAGCGGTTGTGAGATTCGACACCGAAAAAACTCCGAAACTCAACATGCTGCTTCTAGTAGAGACAAATGACATAGCTGATGTTCATGCTAGTACACATATCCCAATTGTTGTTGGAGCTCAAATACGCTATGTATTTTCAGACAAGACAGAAACAGATTGTCTTTTGTTCTACCTTAGGGCCAGGGCTAGTGTACACGGGAAGAATTATGGGAGCTCCTTGGTTACTACTGATAATAGTTCAACAACAGCTGTTATTCCGGAACGGAGATGGAAACTCAAATATGAAATTGCAGTTGATCCCAAACTAATGAGCATGCTACATAGAAACTCAAATAGAGATGAAAGAGTAACTGCTCATGAGTTTTTTCTTACATTGGTTGCTTGTAATACTGTGATTCCTATATTTACTAATGGTGGATTTTCTGGTTGTGGAACAAGTGAATCAAATGGATATGTAGCATGCATTGTTTACCAAGGTGAATCCCCTGATGAACAAGCTCTAGTTTCTGCGGCATCTGCATGTGGATACTATATTCATGGACAGTGTGCTATTCTAATGTTTGATGTTATTGCATGGCTGACATACAAGAATGTCCCTACTAGGCACTGTGATCTTTGTCGGAAAAGTAGGGCTGAAAATTCACGTGGCTTGTGGCAACCATTTACGGCTCTTCTCGGCGATGCTATAAGTGTTGATGTCAAGAAGAATGTTGTTATTACCGTTTCTTCAGATAAAGGTCTTTGTGGAGGAATCAGCTCCACCTCTGTAAAGATAAGCAGATTGTTGAGCAAGTTGAATTCTTTACCTGATAAAGAGACCAAGGTGAAGAATTATCTCAAAGATCAGTTGTTTGGTTTTGCTTTGGTGTCGTTGTCTGAGGTTTTGTTCAATTGTCAATTGCTTATACTGGTGCTACACCTGATGTTATGGCAATATTGGCAAAGCCTTGGCGAGGAGGCCACACGTGCTGCTGCGCAGGACTTGGAAACATCCGAGTCATTGGCCAGAGATTTGGGTTCAGAGACAAATGACATAGTTGATGTTCATGCTAGTACACATATCCCAATTGTTGTTGGAGCTCAAATACGCTATGTATTTTCAGACAAGACAAAAACACTAACAGAAAACAAGATGGAATCCCGGAGGGCTAGTGTACACGGGAAGAATTATGGGAGCTCCTTGGTTACTACTGATAATAGTTCAACAACAGCTATTATTCCGGAACGGAGATGGAAACTCAAATCTGAAATTGCAGTTGATCCCAAACTAATGAGCATGCTGCATAGAAACTCAAATAGAGATGAAAGAGTAACTGCTCATGAGTTTTTTCTTACATTGGTTGCTTGTAATACTGTGATTCCTATATTTACTAATGGTGGATTTTCTGGTTGTGGAACAAGTGAATCAAATGGATATGTAGCATGCATTAATTACCAAGGTGAATCCCTTGATGAACAAGCTCTAGTTTCTGCGGCCTCTGCATGTGGATACTATATTCATGGACAATGTGCTATTCTAATGTTTGATGTTACTGCATGGCTGACATACAAGAATGTCCCTACTTGGCACTGTGATCTTTGTCGGAAAACTAGGGCTGAAAATTCACGTGGCTTGTGGCAACCATTTACGGCTCTTCTCGGCGATGCTATAAGTGTTGATGTCAAGAAGAATGTTGTTATTACCGTTTCTTCAGATAAAGGTCTTTGTGGTGGAATCAACTCCACCTATGTAAAGATAAGCAGATTGTTGAGCAAGTTGAATTCTGAACCTGATAAAGAGACCAACCTTGGCGAGGAGGCCACACGTGCTGCTGCGCAGGACTTGGAAACATCCGAGTCATTGGCCAGAGATTTGGGTAAAATTGAGTTTCCAGATCCTAAGATCGCGAATGAAGATCACTTAATCGTTTCAGAATATTTTGGCATTTCGTGCGAGGAGAGTCAATGCTCTGATAATTCTGATGCTGACAATCATAGTCCTGAAGCTGATGTTCGTCTCGTGGAGAGCTTCTTAGCATGTAGCGATGAGTCTGTGCACGTGCAACCTCATAAGGTTGATTCTACGCCGAGCAATGTGTCGACTAATGGGGTTTTCTTCTTCTGCACCCGAAAGCTCCGAATCATCTGA 3816 0.4177 MEPALGIFSIPSNSFVKTCVICKQIHGSCTQCYKCSTYFHAMCASRAELQIALFLDILQYVRQVFTSCADVLGKKQFCYILARHGITFKLDEEMVNDDEDREVLQDIINNSKLSEGYLTLARDVEVMEPKSNNSKLSEGYLTLARDVEVMEPKSPEDIYKAHLLDGRASAGASADSARQNLAATFVNAFVNAGFGQDKLMTVASDSSSSGSSGNWLSKNKEHGKTSVAASLGMILLWDVDSRLAQLDKYFHSNDNHVITGALLGVGIVNCSIKNDCDPAMALLGDYIDKEDSSTRIGAIMGLGIAYAGSKNEQLRYKLAPILSDPKASLDVIAFTVIALGLVYVGSCNEEVAQAIIFTLMDRSESELGEPLTRLLPLGLGEMHQGPTVLGIVMVAMAEELDVEMAIRSLEHLLQYGEKNIRRAVSLALGLLCISNPKVNVMDTLSRLSHDTDSEVTMATVISLGLIGAGTNNAQRWVPRLPDAYNLLQSMVALGLRPSLQTYTFEESTTCLRVSVILMGFCSELMEVSGQTYQFTMQHCIKYQTKSKTCFLLAIQKFTFDLTEAVVRFDTEKTPKLNMLLLVETNDIADVHASTHIPIVVGAQIRYVFSDKTETDCLLFYLRARASVHGKNYGSSLVTTDNSSTTAVIPERRWKLKYEIAVDPKLMSMLHRNSNRDERVTAHEFFLTLVACNTVIPIFTNGGFSGCGTSESNGYVACIVYQGESPDEQALVSAASACGYYIHGQCAILMFDVIAWLTYKNVPTRHCDLCRKSRAENSRGLWQPFTALLGDAISVDVKKNVVITVSSDKGLCGGISSTSVKISRLLSKLNSLPDKETKVKNYLKDQLFGFALVSLSEVLFNCQLLILVLHLMLWQYWQSLGEEATRAAAQDLETSESLARDLGSETNDIVDVHASTHIPIVVGAQIRYVFSDKTKTLTENKMESRRASVHGKNYGSSLVTTDNSSTTAIIPERRWKLKSEIAVDPKLMSMLHRNSNRDERVTAHEFFLTLVACNTVIPIFTNGGFSGCGTSESNGYVACINYQGESLDEQALVSAASACGYYIHGQCAILMFDVTAWLTYKNVPTWHCDLCRKTRAENSRGLWQPFTALLGDAISVDVKKNVVITVSSDKGLCGGINSTYVKISRLLSKLNSEPDKETNLGEEATRAAAQDLETSESLARDLGKIEFPDPKIANEDHLIVSEYFGISCEESQCSDNSDADNHSPEADVRLVESFLACSDESVHVQPHKVDSTPSNVSTNGVFFFCTRKLRII* 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2774 1271 Pfam RPN1 N-terminal domain 132 163 IPR040892 -
Psa2g2774 1271 Pfam RPN1 N-terminal domain 42 132 IPR040892 -
Psa2g2774 1271 ProSiteProfiles small GTPase Ran family profile. 792 1167 IPR002041 GO:0003924|GO:0005525|GO:0006913
Psa2g2774 1271 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 132 381 - -
Psa2g2774 1271 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 49 131 - -
Psa2g2774 1271 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 380 474 - -
Psa2g2774 1271 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 773 827 IPR035968 GO:0015986|GO:0045261|GO:0046933
Psa2g2774 1271 ProSiteProfiles Extended PHD (ePHD) domain profile. 1 73 IPR034732 -
Psa2g2774 1271 Gene3D - 164 385 IPR011989 -
Psa2g2774 1271 Gene3D - 386 558 IPR011989 -
Psa2g2774 1271 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 2 HOMOLOG 380 474 - -
Psa2g2774 1271 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 2 HOMOLOG 132 381 - -
Psa2g2774 1271 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 2 HOMOLOG 49 131 - -
Psa2g2774 1271 Gene3D - 784 841 - -
Psa2g2774 1271 Gene3D - 1105 1174 - -
Psa2g2774 1271 PRINTS GTP-binding nuclear protein Ran/Tc4 family signature 1052 1070 IPR002041 GO:0003924|GO:0005525|GO:0006913
Psa2g2774 1271 PRINTS GTP-binding nuclear protein Ran/Tc4 family signature 1072 1093 IPR002041 GO:0003924|GO:0005525|GO:0006913
Psa2g2774 1271 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 1094 1156 IPR035968 GO:0015986|GO:0045261|GO:0046933
Psa2g2774 1271 SUPERFAMILY ARM repeat 216 479 IPR016024 -
Psa2g2774 1271 Pfam PHD-zinc-finger like domain 7 53 - -
Psa2g2774 1271 Pfam Proteasome/cyclosome repeat 297 327 IPR002015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2774 Psa-Chr2 322020921 322026928 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2774 602 741 Primary Pumps ATPases AT5G04930 36.806 1.25e-14 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2774 K03028 - gmx:100777078 582.793