Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2771 ATGCATGAGATGGCTTTCTTCCAAGCAAATTTTATGTTACAAACTCCTCATCACCATGAAGATCATCATCATCATCAACCACCTTCACTCAACTCAATTCTACCTCAAGATTATCATGGGGGGCCATCATTTCTAGGGAAGAGATCTATGTCATTCTCATCCGGAATCGAACTCGGAGAAGAAGCCAATATAGCCGAGGAAGATTTATCAGATGATGGATCACAAGCCGGTGAGAAGAAGAGGAGGCTCAACATGGAACAAGTGAAAACACTTGAGAAAAGTTTTGAGCTTGGGAACAAGCTAGAGCCTGAGAGGAAAATGCAGCTTGCAAGAGCTCTTAACTTGCAACCTAGACAAGTTGCTATATGGTTTCAAAATAGAAGAGCTAGATGGAAGACAAAGCAATTGGAAAAAGACTATGATGTCCTTAAAAGACAATATGATGCTGTTAAGTTAGACAATGATGCACTTCAAGCTCAAAACCAAAAACTTCAAGCAGAGATAATGGCATTGAAAAGTAGAGAACCAACTGAATCAATCAACCTAAATAAAGAAACAGAAGGATCAAGCAGCAACAGAAGTGAAAACAGTTCAGATATCAAATTAGATATCTCAAGAACACAAGCTAGTGATAGTCCTCTATCAACACACCATACAACAACAACAAGCAGAACCTTCTTTCCATGTCCTTCTGCTAGGCCTTCAGGAGGAATTGCTCAACTTTTTCAAACTTCTTCGAGGCCGGAACAACTTCAATGCCAAAAGATTGATCAATTGGTCAAAGAAGAAAGCTTAAGCAACATGTTTTGTAGCATGGATGATCAAACTGGTTTTTGGCCATGGTTGGAGCAACAACATTTCAATTGA 867 0.3933 MHEMAFFQANFMLQTPHHHEDHHHHQPPSLNSILPQDYHGGPSFLGKRSMSFSSGIELGEEANIAEEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALNLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQYDAVKLDNDALQAQNQKLQAEIMALKSREPTESINLNKETEGSSSNRSENSSDIKLDISRTQASDSPLSTHHTTTTSRTFFPCPSARPSGGIAQLFQTSSRPEQLQCQKIDQLVKEESLSNMFCSMDDQTGFWPWLEQQHFN* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2771 288 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 3 288 IPR045224 GO:0003700
Psa2g2771 288 ProSiteProfiles 'Homeobox' domain profile. 74 134 IPR001356 GO:0003677
Psa2g2771 288 SUPERFAMILY Homeodomain-like 72 136 IPR009057 -
Psa2g2771 288 CDD homeodomain 79 135 IPR001356 GO:0003677
Psa2g2771 288 Pfam Homeobox associated leucine zipper 134 174 IPR003106 GO:0006355|GO:0043565
Psa2g2771 288 SMART HOX_1 77 138 IPR001356 GO:0003677
Psa2g2771 288 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 3 288 - -
Psa2g2771 288 MobiDBLite consensus disorder prediction 175 199 - -
Psa2g2771 288 Gene3D - 71 140 - -
Psa2g2771 288 Coils Coil 126 174 - -
Psa2g2771 288 Pfam Homeodomain 79 132 IPR001356 GO:0003677
Psa2g2771 288 ProSitePatterns 'Homeobox' domain signature. 109 132 IPR017970 GO:0000981|GO:0006355
Psa2g2771 288 MobiDBLite consensus disorder prediction 182 199 - -
Psa2g2771 288 MobiDBLite consensus disorder prediction 63 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2771 Psa-Chr2 321754955 321757971 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2771 4 288 Homeobox Transcription Factor Family AT1G69780 63.667 1.91e-116 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Psa2g2771 Homeodomain 1.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2771 K09338 - gmx:100808033 467.233