Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2765 ATGCAAGATATGAAGAAGCTGCAGAATCAGAAGCAGAAGCAGCTTGTGAATGAAGAATCTAAGAAGAAGGAGCGTCACATTGTCACGTGGACTCAAGAGGAGGATGATATATTGAGAGATCAAATTGGAATCCATGGAACTGAAAATTGGGCGATAATTGCTTCTAAGTTCAAGGATAAAACAACAAGACAGTGCAGAAGAAGATGGTACACTTATTTGAATTCTGATTTCAAGAAAGGAGGTTGGTCACCAGATGAAGATATGCTCTTATGTGAGGCACAAAAAATATTTGGCAATAGGTGGACAGAAATAGCAAAGGTGGTTTCAGGAAGAACGGATAACGCTGTGAAAAACCGTTTCTCCACATTGTGCAAAAAGAGAGCTAAATATGAGGCCTTAGCAAAAGAGAACAACATTTCGTACACGAATTCAAATAACAAAAGAGTTATTTTCCGAGATGCAGCATCAGATTCTGCAGTAGATTACAAGAAAATGAGGAGGTCACATATCCCTGATGATGCGGAAAAGATCAACTTCGCAGATAGATCACATAAACAAAACGAAACTTCAAGAGCACCATTGGCAGTTTTAGCTCAAAACTCTCATAATATCAACAACTTGCCTGATCAGAATGATGTCTGCAATGTGAAGTTCGGTGGCTTCGCTCCAAACAACAAGATTCAAGGAACATTCCTTAAAAAGGATGATCCAAAGATAAACGCGTTAATGCAACAAGCCGAGCTTCTAACATCATTAGCTCTAAAAGTTGATGCGGAGAACATGGACCAAAGTCTTGAAAATGCATGGAAGATTCTTCAAGAGTTTATGAACAGAAACAAAGAGTCAGATATTCCTGGATACAAGATTCCCGATTTACAGCTCGTAGATCTTAAAGACTTATTGGAAGACTTAAAGAATAGTAATGAGGAAATTCAACCATGTTGGAGGTACATGGAATTATATGAAGACTCTCCAAGCAGTTCTGAAGGATCAACTATTCTGCCTCATTCTGCTGCTGAGAATTTGGAACACTCACTACATCAAGATAATGGAACTGAACTGAACTCAATGCAAATTGGAGATCAAAAGGGAGATGGAGGATGTGATCAAGTAGTTCTTTCTAGCGCAACTATGAATCAAGATATATTCACATCTTGTGAGGAACAGATAAACAATAATGGCATTGGCATTGTTTCATCCCTATCAACTGCAGAGTTTAGTTCCCCTCTTCAAGTTACACCTATGTTCAGATCCTTAACTGCAGCAATTCCAAGTCCACAATTTTCAGAAAGTGAAAGGAACTTCCTTATGAAAACACTTGGAATGGATTCTCCATCCCTCAACCCAATCGTGAACCCCTCGCAACCGCCACTCTGCAAACGAGCCCTCCTACAAAGTTAA 1401 0.3926 MQDMKKLQNQKQKQLVNEESKKKERHIVTWTQEEDDILRDQIGIHGTENWAIIASKFKDKTTRQCRRRWYTYLNSDFKKGGWSPDEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKYEALAKENNISYTNSNNKRVIFRDAASDSAVDYKKMRRSHIPDDAEKINFADRSHKQNETSRAPLAVLAQNSHNINNLPDQNDVCNVKFGGFAPNNKIQGTFLKKDDPKINALMQQAELLTSLALKVDAENMDQSLENAWKILQEFMNRNKESDIPGYKIPDLQLVDLKDLLEDLKNSNEEIQPCWRYMELYEDSPSSSEGSTILPHSAAENLEHSLHQDNGTELNSMQIGDQKGDGGCDQVVLSSATMNQDIFTSCEEQINNNGIGIVSSLSTAEFSSPLQVTPMFRSLTAAIPSPQFSESERNFLMKTLGMDSPSLNPIVNPSQPPLCKRALLQS* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2765 466 Gene3D - 16 78 - -
Psa2g2765 466 MobiDBLite consensus disorder prediction 1 20 - -
Psa2g2765 466 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 128 IPR017930 -
Psa2g2765 466 Gene3D - 80 150 - -
Psa2g2765 466 SUPERFAMILY Homeodomain-like 26 120 IPR009057 -
Psa2g2765 466 SMART sant 78 126 IPR001005 -
Psa2g2765 466 SMART sant 26 75 IPR001005 -
Psa2g2765 466 CDD SANT 29 73 IPR001005 -
Psa2g2765 466 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 77 IPR017930 -
Psa2g2765 466 Coils Coil 1 24 - -
Psa2g2765 466 ProSiteProfiles Myb-like domain profile. 30 73 IPR001005 -
Psa2g2765 466 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Psa2g2765 466 Pfam Myb-like DNA-binding domain 30 90 - -
Psa2g2765 466 PANTHER TRANSCRIPTION FACTOR MYB88 10 464 - -
Psa2g2765 466 CDD SANT 82 123 IPR001005 -
Psa2g2765 466 PANTHER MYB PROTEIN-RELATED 10 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2765 Psa-Chr2 320015748 320022746 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2765 15 317 MYB Transcription Factor Family AT2G02820 61.321 5.74e-132 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Psa2g2765 Myb_DNA-bind_6 4.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2765 K09422 - gmx:100807667 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2765 2 320015748 320022746 Psa2g2765 2 320015748 320022746 ECH