Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2757 ATGGAATTGGAAGGTGATCATCAAAGTAATGGAATCCGAAGCAGACCAAATTTCCCTCTTCAGCTTTTAGAAAAAAACAACATCATCGAACATGTCTCCGAAGAACAACCTTGTTCAACCACCGCAAACGACGGTTCTTCTACTGCCATGGTATCATCAGACCAACAGAAAAAGCCACCGCCGAAGCGGGCCTCGACTAAAGATCGGCACACGAAGGTCGACGGACGAGGCCGCCGGATCCGTATGCCGGCTGCCTGCGCCGCGAGAGTGTTCCAGCTCACGCGTGAGCTGGGACACAAATCCGACGGCGAGACGATCGAGTGGCTACTTCAGCAGGCTGAGCCATCGGTTATAGCCGCAACAGGAACAGGAACAATCCCAGCTAATTTCACGAGTCTTAACATCTCTCTTAGAAGCTCTGGTTCAACTATGTCTGCTCCGTCGCACTATTTTAGAGGTAATTACTTCAACCCTAGTTCGTTTTCATCTGCGGCCGCGGCGGCTCAGATTCGAAACCGCGCTGAATGGGATAGAACTATGAACATGAACGTTGTAACTGAAGATTCTAGAAGAACTAACACTATGCTAGAGAATCCTTCTTCTTTATCAGCGATTTTGAATTTCAACAACGTGCAAAATGCTATTCTTCAAGCTAAACAAGAGCTCCGGGATGAAAACACTACCTCCGCCGCTTGCGGCGCCAGCAGCAGATTTGAATTGTTGGGTGCTGATTCTGACGGAAGCATAGGGAGAAAAAGAAGGTCATCAGAGCATGAATTGTTATCACAAAATATGGGAAGCTATTTGTTACAATCAAATGTGGGGTCACTTCCTTCGAGCCATGCTTCCAATACGGCAGCGTTTTGGATGGTAACTGGTAATGGGAACCAAAGTGTTAATAGTGGTGGTAATGGTAATGGAAATGGAAATGGAAATGATCCAATCTGGGCAATTCCTTCTGTTGGAAATAATGGCTTATATAGAGGAGCCATGTCTTCTCCAAACGGAATTCATTTCATGAATTTCGGTTCTCCAATGAATCTAATGCCAGGAAGTCAATATGGTTCTGGAATCATCGGCGGTGGCGGAGGAGGAAGCGGTGGTGGTATTCTCGCCGAAAGCAATTTAAGTATGCTTTCCGCCATGAATGCCTATAGGCAGATTTCTGCAAATGGTATGTCCGAATCCTCCGGACAACACCACGGTGGAGGAGGAGGAGGAGATGACGACGGACATGACTCAAGCAGTCAACACTCTTAA 1260 0.4698 MELEGDHQSNGIRSRPNFPLQLLEKNNIIEHVSEEQPCSTTANDGSSTAMVSSDQQKKPPPKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSTMSAPSHYFRGNYFNPSSFSSAAAAAQIRNRAEWDRTMNMNVVTEDSRRTNTMLENPSSLSAILNFNNVQNAILQAKQELRDENTTSAACGASSRFELLGADSDGSIGRKRRSSEHELLSQNMGSYLLQSNVGSLPSSHASNTAAFWMVTGNGNQSVNSGGNGNGNGNGNDPIWAIPSVGNNGLYRGAMSSPNGIHFMNFGSPMNLMPGSQYGSGIIGGGGGGSGGGILAESNLSMLSAMNAYRQISANGMSESSGQHHGGGGGGDDDGHDSSSQHS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2757 419 MobiDBLite consensus disorder prediction 60 75 - -
Psa2g2757 419 ProSiteProfiles TCP domain profile. 66 120 IPR017887 -
Psa2g2757 419 MobiDBLite consensus disorder prediction 405 419 - -
Psa2g2757 419 MobiDBLite consensus disorder prediction 392 419 - -
Psa2g2757 419 Pfam TCP family transcription factor 65 219 IPR017887 -
Psa2g2757 419 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 8 419 IPR005333 GO:0003700
Psa2g2757 419 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 8 419 - -
Psa2g2757 419 MobiDBLite consensus disorder prediction 34 75 - -
Psa2g2757 419 MobiDBLite consensus disorder prediction 34 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2757 Psa-Chr2 317012801 317015464 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2757 57 413 TCP Transcription Factor Family AT3G47620 41.133 1.52e-52 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Psa2g2757 TCP 2.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2757 - - gmx:100809966 483.796