Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2726 ATGAGCGATCACTTGGTACTCTTCGTTGACCAACTCGCACGCCCAGTTCCTGTTGACCCTGTTGAGCAGCCTGCGCAGCTTCCTTCCGAACCATCGCCGTCTCCGGTTGCTGCCGATGCTGATGCCGCATCTGGATCCTCCGGATCTGTTTCGCCGGTGGATCAAGAGGGAGATGATCGTGGTGAGGAGGAGCCGTTGATCCAGACAGTGGAGTGCCGTATCTGCCAGGAGGAGGATAGCGTTTCCAATTTGGAGACTCCCTGCGCTTGCAGGGGTAGTCTTAAGTATGCTCACAGAAAGTGTGTCCAGCATTGGTGCAACGAGAAAGGAGACATTACTTGTGAGATATGTCATCAGCCTTATCAACCTGGGTATACAGCCCCACCACCTCGCCCTAATCCTGAAGAAACCACTATTGAAATAGGAGGAGGCTGGACATTATCTGGCTCACCCTTGGACTTGCGTGATCCTCGCCTATTGGCAATTGCAGAGGCAGAGCGTCAATTTCCTGGTCGTATTCTGCAACGGAGGCGACAAAGACAAGAGGCAGCAGCACTAGCGGCAACCCAAGTTGCGTTTGTTCTAAATTCTGGGCAGCGAAGAGGTCTACAATTTGCGATAGCACCAGTTCCTACAGTACAGCAGGAACAAGTGTAG 657 0.5266 MSDHLVLFVDQLARPVPVDPVEQPAQLPSEPSPSPVAADADAASGSSGSVSPVDQEGDDRGEEEPLIQTVECRICQEEDSVSNLETPCACRGSLKYAHRKCVQHWCNEKGDITCEICHQPYQPGYTAPPPRPNPEETTIEIGGGWTLSGSPLDLRDPRLLAIAEAERQFPGRILQRRRQRQEAAALAATQVAFVLNSGQRRGLQFAIAPVPTVQQEQV* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2726 218 CDD RING_CH-C4HC3_MARCH 72 118 - -
Psa2g2726 218 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 169 IPR033275 -
Psa2g2726 218 MobiDBLite consensus disorder prediction 17 63 - -
Psa2g2726 218 SUPERFAMILY RING/U-box 69 122 - -
Psa2g2726 218 SMART ringv_2 71 118 IPR011016 GO:0008270
Psa2g2726 218 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED 1 169 - -
Psa2g2726 218 Pfam Protein of unknown function (DUF3675) 123 181 IPR022143 -
Psa2g2726 218 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 127 IPR013083 -
Psa2g2726 218 ProSiteProfiles Zinc finger RING-CH-type profile. 64 124 IPR011016 GO:0008270
Psa2g2726 218 Pfam RING-variant domain 72 117 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2726 Psa-Chr2 311729189 311733127 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2726 71 193 C3H Transcription Factor Family AT2G37950 26.984 8.24e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2726 - - gmx:100812998 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2726 2 311729189 311733127 Psa2g2726 2 311729189 311733127 ECH