Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2703 ATGATGGCTTCCGAATCTGAAGTTTCTGAACTTTCTTATATCTTCGAAAGAATGATCAGAAACAGAGACATGTCTCTGTTGTTGCCCTTCATCCAAGGTCTTTCCGAATCTTCAATTCAAAGACACAGGGACAACCCAGTTCAAGAATCTTCGAGCAACGAAGAAGATTCCAACCGTCAAAGAATCATCTTGGTGAACCCTTCTACACAGCGCATGATCGTGATCGAAGGAGTTTCAAGTCTGGAAACTCTGTTTCAGGAACTTGAAAGTACTAGAAAGAAGGGTCAGCCACCAGCTTCAAAGGAGTCGATAGAAGCTATGAAGAGGGTTGAGATTGAAGAAAGTGATCACGGAGAGTGTGTTGTTTGTTTGGAGGAGTTTGAGGTTGGTGGGGTTGTTAGAGAAATGCCATGTGAGCATAGGTTTCATGGGACCTGTATTGAGAAGTGGTTAGGGATTCATGGGTCTTGTCCTGTTTGTAGGTATCAGATGCCTGTTGATGAGAAGGACGAGGGAAAGAAAATTGGGGAAGATGAAGAAGAAGAAGGTGGAGAGAGAGGGAGGGTTGGTGGTGAAGTTTGGGTTAGTTTTTCTATTAGTAGGAGAAGGGGAAATCGTGATCAAAATCAAGCTACTTCTGGTGGTGATTCAATTGATTCTTCATCAAGCTCTAGAGATGGTGATGAGTTTGGGAATTGA 699 0.4306 MMASESEVSELSYIFERMIRNRDMSLLLPFIQGLSESSIQRHRDNPVQESSSNEEDSNRQRIILVNPSTQRMIVIEGVSSLETLFQELESTRKKGQPPASKESIEAMKRVEIEESDHGECVVCLEEFEVGGVVREMPCEHRFHGTCIEKWLGIHGSCPVCRYQMPVDEKDEGKKIGEDEEEEGGERGRVGGEVWVSFSISRRRGNRDQNQATSGGDSIDSSSSSRDGDEFGN* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2703 232 MobiDBLite consensus disorder prediction 201 232 - -
Psa2g2703 232 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 17 173 - -
Psa2g2703 232 SUPERFAMILY RING/U-box 103 167 - -
Psa2g2703 232 PANTHER - 17 173 - -
Psa2g2703 232 SMART ring_2 120 160 IPR001841 -
Psa2g2703 232 MobiDBLite consensus disorder prediction 39 60 - -
Psa2g2703 232 Pfam Ring finger domain 119 161 IPR001841 -
Psa2g2703 232 ProSiteProfiles Zinc finger RING-type profile. 120 161 IPR001841 -
Psa2g2703 232 CDD RING-H2_PA-TM-RING 119 161 - -
Psa2g2703 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 85 167 IPR013083 -
Psa2g2703 232 MobiDBLite consensus disorder prediction 169 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2703 Psa-Chr2 310847812 310849411 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2703 2 217 C3H Transcription Factor Family AT1G26800 49.099 4.44e-62 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2703 - - lang:109356689 230.335