Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa2g2703 | ATGATGGCTTCCGAATCTGAAGTTTCTGAACTTTCTTATATCTTCGAAAGAATGATCAGAAACAGAGACATGTCTCTGTTGTTGCCCTTCATCCAAGGTCTTTCCGAATCTTCAATTCAAAGACACAGGGACAACCCAGTTCAAGAATCTTCGAGCAACGAAGAAGATTCCAACCGTCAAAGAATCATCTTGGTGAACCCTTCTACACAGCGCATGATCGTGATCGAAGGAGTTTCAAGTCTGGAAACTCTGTTTCAGGAACTTGAAAGTACTAGAAAGAAGGGTCAGCCACCAGCTTCAAAGGAGTCGATAGAAGCTATGAAGAGGGTTGAGATTGAAGAAAGTGATCACGGAGAGTGTGTTGTTTGTTTGGAGGAGTTTGAGGTTGGTGGGGTTGTTAGAGAAATGCCATGTGAGCATAGGTTTCATGGGACCTGTATTGAGAAGTGGTTAGGGATTCATGGGTCTTGTCCTGTTTGTAGGTATCAGATGCCTGTTGATGAGAAGGACGAGGGAAAGAAAATTGGGGAAGATGAAGAAGAAGAAGGTGGAGAGAGAGGGAGGGTTGGTGGTGAAGTTTGGGTTAGTTTTTCTATTAGTAGGAGAAGGGGAAATCGTGATCAAAATCAAGCTACTTCTGGTGGTGATTCAATTGATTCTTCATCAAGCTCTAGAGATGGTGATGAGTTTGGGAATTGA | 699 | 0.4306 | MMASESEVSELSYIFERMIRNRDMSLLLPFIQGLSESSIQRHRDNPVQESSSNEEDSNRQRIILVNPSTQRMIVIEGVSSLETLFQELESTRKKGQPPASKESIEAMKRVEIEESDHGECVVCLEEFEVGGVVREMPCEHRFHGTCIEKWLGIHGSCPVCRYQMPVDEKDEGKKIGEDEEEEGGERGRVGGEVWVSFSISRRRGNRDQNQATSGGDSIDSSSSSRDGDEFGN* | 233 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa2g2703 | 232 | MobiDBLite | consensus disorder prediction | 201 | 232 | - | - | |
Psa2g2703 | 232 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 17 | 173 | - | - | |
Psa2g2703 | 232 | SUPERFAMILY | RING/U-box | 103 | 167 | - | - | |
Psa2g2703 | 232 | PANTHER | - | 17 | 173 | - | - | |
Psa2g2703 | 232 | SMART | ring_2 | 120 | 160 | IPR001841 | - | |
Psa2g2703 | 232 | MobiDBLite | consensus disorder prediction | 39 | 60 | - | - | |
Psa2g2703 | 232 | Pfam | Ring finger domain | 119 | 161 | IPR001841 | - | |
Psa2g2703 | 232 | ProSiteProfiles | Zinc finger RING-type profile. | 120 | 161 | IPR001841 | - | |
Psa2g2703 | 232 | CDD | RING-H2_PA-TM-RING | 119 | 161 | - | - | |
Psa2g2703 | 232 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 85 | 167 | IPR013083 | - | |
Psa2g2703 | 232 | MobiDBLite | consensus disorder prediction | 169 | 232 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa2g2703 | Psa-Chr2 | 310847812 | 310849411 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa2g2703 | 2 | 217 | C3H Transcription Factor Family | AT1G26800 | 49.099 | 4.44e-62 | 191 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa2g2703 | - | - | lang:109356689 | 230.335 |