Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2700 ATGAAGAATAATCAAAGTATGCATTTTGTTCTATCAACTCATGCAAAACCAAGGCTCAAATGGACTCATCAACTTCACCAAAGATTCATTGATGCAATTAATCAACTTGGAGGTGCAGAAAAAGCAACACCAAAGAGTATTATGAGAGTGATGCAAATTCCAGGACTTACTTTGTACCATCTCAAGAGCCATTTACAGAAATATAGACTTGGGAAAAGCCAACAACATCTAGAAACATGTTCTGACAACAAACAAGATTTCACAGAAATTAAGAGCAGTGATGAAAATTGTGGCAGGGAAATTAGTTTTGTGGACCAGAATCAAATCACTGAAAACATTGAGATAGCTCAAGCTCTTGAAATGCAAATGGAAGTAGAGAAAAAACTTTATGAACAAATTGAGGTGCAAAAACGTTTGCAACTTCGAATCGAAGCTCAAGGAAAATATTTACAATCAGTATTGAAGAAGGCTCAAGAAACACTTTCCGGATTCAATTCTTCTTCGATTGGTATAAAATTCACAAAAGATGAACTCTCTCAATTGGTTGCAATGCTAAACAATACTTGTCCAAGTTCTTCAATTTCAGAACTAACAGAGTCAAGAGGATTAAGTTTAGAATGTGGTGAGAGGAAACAGAAAAATGGAACTATGTGTTCATTGGAAAGTTCATTAACATCTTCTGAAAGCTCAGAAAGAAAAGAAGAAATTGGAAACTTAGAAAATTTTGATACTAATTCATTTGAATTGCCACTCAGGAATGAGCATTCAAATGCGACATCAGTGTCGTGTTCGTGTTTGATGTCTGCGTCGTATAAGATTGAGCCCGATGACTCATCTGATGGGAACAAGTTGAAGAAAGTAAAGCTGTCCGAAATGTTAGACTTGAATAGCCATTTTCAGAATGACATGGACTCAAGTCACTCAACAGCTTCAAAAACATTATTATTAGATTTAAATTGTAGTTTAAGCTCTTGTGAACCATGA 984 0.3516 MKNNQSMHFVLSTHAKPRLKWTHQLHQRFIDAINQLGGAEKATPKSIMRVMQIPGLTLYHLKSHLQKYRLGKSQQHLETCSDNKQDFTEIKSSDENCGREISFVDQNQITENIEIAQALEMQMEVEKKLYEQIEVQKRLQLRIEAQGKYLQSVLKKAQETLSGFNSSSIGIKFTKDELSQLVAMLNNTCPSSSISELTESRGLSLECGERKQKNGTMCSLESSLTSSESSERKEEIGNLENFDTNSFELPLRNEHSNATSVSCSCLMSASYKIEPDDSSDGNKLKKVKLSEMLDLNSHFQNDMDSSHSTASKTLLLDLNCSLSSCEP* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2700 327 Pfam Myb-like DNA-binding domain 18 69 IPR001005 -
Psa2g2700 327 Gene3D - 15 73 - -
Psa2g2700 327 Coils Coil 116 136 - -
Psa2g2700 327 Pfam MYB-CC type transfactor, LHEQLE motif 113 160 IPR025756 -
Psa2g2700 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 73 IPR017930 -
Psa2g2700 327 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 308 - -
Psa2g2700 327 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 308 IPR044848 GO:0003700
Psa2g2700 327 SUPERFAMILY Homeodomain-like 14 71 IPR009057 -
Psa2g2700 327 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 16 71 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2700 Psa-Chr2 310811500 310813701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2700 7 199 G2-like Transcription Factor Family AT1G69580 57.500 4.65e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Psa2g2700 Myb_DNA-binding 5.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2700 - - mtr:MTR_5g041350 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2700 2 310811500 310813701 Psa2g2700 2 310811500 310813701 ECH