Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2690 ATGGCTAGTAGTATGATCTCTTCACAAGATAACCAAAATGCCCTTATTTACCCTTCTTCTATGCAAATGGTATATTCAGACCTTGGATCTCTCTCTCTTACTTCAAACAAAGAGAGTTATGGTTGCAAGAGTTTTGTGATGGATGATGATATGGAAGGAAAAGGCTCTTATTGTAGTGAGGAAACTAACCCTAATGAGAATAATGGAAGTGGGAAAGAGGAAGATAATGGACAGTCTAGTAAATGTGCAAGAGGACATTGGAGACCTGCTGAAGATTCCAAGCTTAAGGAACTTGTTGCTCTTTATGGTCCTCAGAACTGGAATCTCATTGCTGAAAAGTTAGAAGGAAGATCAGGCAAGAGTTGTAGGTTAAGATGGTTCAACCAACTGGATCCAAGAATAAACAGAAGAGCATTCAATGAAGAAGAGGAAGAGAGATTAATGCAAGCGCATAGAATTTATGGAAACAAATGGGCCATGATAGCAAGACTATTTCCAGGAAGAACAGATAATGCTGTAAAGAATCACTGGCATGTTATAATGGCAAGAAAGTACAGAGAACAATCTAGTGCATACAGGAGAAGAAGATTAATGAACCAATCTAATGCTTTCAGAAGAATGGATCAAAATCCAAGCTTTTTCAGCAGGGACACCACAACAATGGAGACAGAACCATCACCACCTTATTTTCTCAATGGAGCCCCACTTGGGAATAGTATGTCCATTTTTCCATATGCTGCTTCTTTACAACATGGTGCTCATGGTGGTGGGGTTGAGTATGGTTTAAATGGTTTACCTCACATGAGTGGTGAGAGAGAAGGTTTTCAAGGACCCCTACATGTTGGTTTCTATGCTCAACAAGCACCTTTTGATTTCTTCTCTGGTAGTAGAAGAAATGAAATGGTGGAAGAATCAATGAATCATACAAGATATTGGGATGGGACTAATGATGAATATCAACAACAACAACAAATATCAAGTTTCCACCATCATTATCCTCAACAACAATATCTCATGTCAATGCAGCAACAACAACAGCAGCAACAAAACAATCACAATTTCAACAGTTTCTCAAATTCCTTAGCATCATCAACACCTCATAACAACACAGAAAACAGTGGAAAAGTTCTGATTGATGACACACAGGAACCAGTTGAAACTCGTCAATTTTTTGACTTCCTTGGAGTAGGTGCTACATGA 1200 0.3867 MASSMISSQDNQNALIYPSSMQMVYSDLGSLSLTSNKESYGCKSFVMDDDMEGKGSYCSEETNPNENNGSGKEEDNGQSSKCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFNEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLMNQSNAFRRMDQNPSFFSRDTTTMETEPSPPYFLNGAPLGNSMSIFPYAASLQHGAHGGGVEYGLNGLPHMSGEREGFQGPLHVGFYAQQAPFDFFSGSRRNEMVEESMNHTRYWDGTNDEYQQQQQISSFHHHYPQQQYLMSMQQQQQQQQNNHNFNSFSNSLASSTPHNNTENSGKVLIDDTQEPVETRQFFDFLGVGAT* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2690 399 PANTHER MYB TRANSCRIPTION FACTOR 48 399 - -
Psa2g2690 399 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 131 185 IPR017930 -
Psa2g2690 399 ProSiteProfiles Myb-like domain profile. 79 130 IPR001005 -
Psa2g2690 399 SUPERFAMILY Homeodomain-like 83 177 IPR009057 -
Psa2g2690 399 ProSiteProfiles Myb-like domain profile. 131 181 IPR001005 -
Psa2g2690 399 MobiDBLite consensus disorder prediction 58 76 - -
Psa2g2690 399 CDD SANT 138 178 IPR001005 -
Psa2g2690 399 Gene3D - 84 135 - -
Psa2g2690 399 Pfam Myb-like DNA-binding domain 87 147 - -
Psa2g2690 399 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 130 IPR017930 -
Psa2g2690 399 CDD SANT 87 128 IPR001005 -
Psa2g2690 399 Gene3D - 137 209 - -
Psa2g2690 399 PANTHER MYB PROTEIN-RELATED 48 399 - -
Psa2g2690 399 MobiDBLite consensus disorder prediction 56 86 - -
Psa2g2690 399 SMART sant 135 183 IPR001005 -
Psa2g2690 399 SMART sant 83 132 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2690 Psa-Chr2 309703353 309706487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2690 18 214 MYB Transcription Factor Family AT1G69560 54.583 2.10e-78 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Psa2g2690 Myb_DNA-bind_6 1.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2690 K09422 - gmx:100789305 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2690 2 309703353 309706487 Psa2g2690 2 309703353 309706487 ECH