Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2628 ATGAATTTTTTGTTGAATAATACACATATTGGTTCAGGCTCCTCGACACCTGAGCTGAAAGATTTGGTAGAGGAGGAGAAACAAAAGGAAGATTTTCATAAAGAAGCTTACATTGCTCATGAAATTGCTACATCTCAAAAGAACCCTGGTAATTTTCCTGTGGAACGGGAAGCAGATGCTACTTCTGTGGAATTTATTCCATTTGAGAGAATGAATTCGGTAAACTTAGTAGCAGCTGAGGTTTCACTGCGGCCGACATTGTCACTTGACTCAAGTCTCTTGAAGACGCTGCTGCTCCTCTTATTGCGTTTCTTCGGAATGCTGTTTGAATATGGAAACTACTCTGGTGTTGCTGATTATCTTTATCAGTACAGAGCATTATGCACTAATAGTGAAAGGAGTTTGAGTGCATTATGGGGAAAGCCGACAGTTGAAGTATTGGTGCAAAACTTGGATGTCGCTCTTGAAGAGCTAAATCGCTTGAAGGAAATAATTGACTTTAAAAAAATTTGTTCATCACCTAAATCAGCCGTTGTTGTACCAGCCGATAGAGCAAATGCAGCAAGCTCTGCTCTCTTTCTCTACATCCTTCTAGGCCTTGGACAACCGATGACCGAGTGA 621 0.409 MNFLLNNTHIGSGSSTPELKDLVEEEKQKEDFHKEAYIAHEIATSQKNPGNFPVEREADATSVEFIPFERMNSVNLVAAEVSLRPTLSLDSSLLKTLLLLLLRFFGMLFEYGNYSGVADYLYQYRALCTNSERSLSALWGKPTVEVLVQNLDVALEELNRLKEIIDFKKICSSPKSAVVVPADRANAASSALFLYILLGLGQPMTE* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2628 206 Coils Coil 144 164 - -
Psa2g2628 206 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 98 175 IPR016650 GO:0003743|GO:0005737|GO:0005852
Psa2g2628 206 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 98 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2628 Psa-Chr2 302172266 302173275 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2628 101 178 Eukaryotic Initiation Factors Gene Family AT3G57290 66.667 1.32e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2628 K03250 - mesc:110607973 107.842