Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2618 ATGATTATGAAAGATTTTCAAACAAGAAGGATCGATATACAAGGTGTGATGGCAAAAGTGAAGAAGTTGTTGAAATGTCATGAAGAATTATTATTAAAATTTAATAACTTTTTGCCTGATGGATTAGAAATCAAACCTCCAATAAAGAAGCCAAAGATGCCCGAAGTGAATAAAGAAAAAGCTGAAAAATATTTGTGCAAAGTGAAGACTCGATTTCGACGTCAACCTCATGTATACGAATTATTTCTAGAGATATTGAGTATGTACAAAAACAAAGATAAGAGTCTTGAGGAGCTGTATGAAATGGTTACTTCACTTTTTAAAGACCATTCTGATCTCGTCAATGGATTTATTGATTTTCTTCCATGA 369 0.3171 MIMKDFQTRRIDIQGVMAKVKKLLKCHEELLLKFNNFLPDGLEIKPPIKKPKMPEVNKEKAEKYLCKVKTRFRRQPHVYELFLEILSMYKNKDKSLEELYEMVTSLFKDHSDLVNGFIDFLP* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2618 122 SUPERFAMILY PAH2 domain 52 122 IPR036600 GO:0006355
Psa2g2618 122 ProSiteProfiles PAH domain profile. 1 41 IPR003822 GO:0006355
Psa2g2618 122 Pfam Paired amphipathic helix repeat 77 121 IPR003822 GO:0006355
Psa2g2618 122 Pfam Paired amphipathic helix repeat 2 38 IPR003822 GO:0006355
Psa2g2618 122 SUPERFAMILY PAH2 domain 2 40 IPR036600 GO:0006355
Psa2g2618 122 Gene3D Paired amphipathic helix 61 122 IPR036600 GO:0006355
Psa2g2618 122 Gene3D Paired amphipathic helix 1 39 IPR036600 GO:0006355
Psa2g2618 122 ProSiteProfiles PAH domain profile. 52 122 IPR003822 GO:0006355
Psa2g2618 122 PANTHER SIN3B-RELATED 2 122 IPR039774 GO:0003714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa2g2618 PAH 1.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2618 - K11644 mtr:MTR_7g013410 128.257