Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2601 ATGTCGCTTTCCTACTCCAACTACTTCCCGGACGATGACCTCCTATGCAGCGAGGAAACCTCCAGCATCTTGTCCGGAGATTCACCGGCAGAATGCTTATCTGATGTCGATTCGTCTCCTCCGCCGGAGGATGAGTTCATCGCCGGATTAATCGATGACGAACATAAGTTCGTTCTCGGATTTGACTATTTCTCTAAGTTACAGTCTCGCAAGATCGATGCATCGGCCAGGGAAGAATCCGTTGCATGGATCCTAAAGGTGCAGGCTTATTATGGTTTTCAACCGCTCACGGCTTATCTCGCCGTCAACTACATGGATCGGTTCTTGAATTCACGGCAGTTGCCGCAATCAAATGGGTGGCCACTACAACTTCTATCAGTTGCTTCCTTGTCTCTAGCGGCCAAGATGGAGGAAACTCTAGTCCCTTCTCTATTGGACCTTCAGCTAGAAGGTGCCAAATACATATTTGAACCCAGAACAATTAGAAGAATGGAGCTACTTGTTCTAAGAGTCTTGGATTGGAGGCTAAGATCAGTTACCCCATTTAGCTTCCTCAGTTTCTTTGCATGCAAGTTAGATTCAACTGGAATTTTTACAGGGTTCCTCATTTCACGAGCAACACAAATTATCTTATCTCATATCCAAGAGGCAAACTTTCTTGCATATTGGCCATCATGCATTGCTGCAGCAGCTATTCTCTATGCAGCTAATGAAATTCCCAATTGGTCTCTAGTTAAGCCGGAGCATGCGGAGACATGGTGCGAGGGGCTAAGAAAAGAGAAAATTATAGGGTGCTACAGGTTAATGGAAGAACTTATGATTGACAATAGCCAAAGGAAAGCCCCTAAAGTGTTGCCACAGCTGCGAGTGACAACTCAGCCACTAATGAGGTCAAGTGTCTCGTCATCCTCCTCTTCTCCTTCCTCCTCACCATCCTATAATAAAAGAAGGAAATTAAATAACTGTTGGTGGGTGGATGATGACAAAGGAAACTCCCAATGA 1002 0.4521 MSLSYSNYFPDDDLLCSEETSSILSGDSPAECLSDVDSSPPPEDEFIAGLIDDEHKFVLGFDYFSKLQSRKIDASAREESVAWILKVQAYYGFQPLTAYLAVNYMDRFLNSRQLPQSNGWPLQLLSVASLSLAAKMEETLVPSLLDLQLEGAKYIFEPRTIRRMELLVLRVLDWRLRSVTPFSFLSFFACKLDSTGIFTGFLISRATQIILSHIQEANFLAYWPSCIAAAAILYAANEIPNWSLVKPEHAETWCEGLRKEKIIGCYRLMEELMIDNSQRKAPKVLPQLRVTTQPLMRSSVSSSSSSPSSSPSYNKRRKLNNCWWVDDDKGNSQ* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2601 333 CDD CYCLIN 83 169 IPR013763 -
Psa2g2601 333 Pfam Cyclin, C-terminal domain 179 289 IPR004367 -
Psa2g2601 333 SMART Cyclin_C_2 179 306 IPR004367 -
Psa2g2601 333 SUPERFAMILY Cyclin-like 161 275 IPR036915 -
Psa2g2601 333 SUPERFAMILY Cyclin-like 38 176 IPR036915 -
Psa2g2601 333 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 321 - -
Psa2g2601 333 Gene3D - 60 177 - -
Psa2g2601 333 PANTHER CYCLINS 1 321 IPR039361 -
Psa2g2601 333 Pfam Cyclin, N-terminal domain 50 176 IPR006671 -
Psa2g2601 333 Gene3D - 50 240 - -
Psa2g2601 333 ProSitePatterns Cyclins signature. 77 108 IPR006671 -
Psa2g2601 333 MobiDBLite consensus disorder prediction 295 315 - -
Psa2g2601 333 SMART cyclin_7 82 170 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2601 Psa-Chr2 299913142 299919047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2601 1 333 Core Cell Cycle Gene Families AT1G70210 58.651 2.24e-128 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2601 K18810 - gmx:100775224 491.5