LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa2g2594	ATGGAAGGTAACATAAAAGGACTTATTGTTGATGAAGATGGTTTGGATGTTGTTTATTGGAGAAAGCTTCAAGATCAAAACTTTGATAAGGATATGAAGAAGGGTGTTTTTTTGAATAGTCCTAGAAACAAAGATCATGAAGATGATCAAAGGAAGAATAATCAAGAAACTCATTTGCTTAGAGGAAAATCTTCAACTTCACATATGAATATTTTTCCACAAGAATCATCATATACAATTATGAAAATTACACCTCCTGCTCCTCCTCCTCCTATTCAACCATTTTCTCTAAACCTTCTTCCTTCATCACCTAAAAAGCTTTCTACTTTTTTCTCATCAATTCCAAATGTGACAAATCATGCACCACCAATGGTTTCTGATGATACAAAGAGTCAAGAACCACCTCCTCCTCCGCCACCTCCTCCTCCATCAGTAGTACCTGATAGAAAAAGCTCAGCACCGCCGCCACCTCCTCCTCCTCCACCAATTCTAGATAGAAAGACTCTTGCAACACCGCCTCCGCCACCTCCTCCTCCTTCGCTATCAACTAGAAAGATTTCTACACCAGCGCCACCGCCACCACCAAAGACAAGTGGATTGAAGTTGAAGTCATCATCAAAACCACCACCTACACCTCTTGAAACAAAGTCTGCCAACAATAAACAAGGGAGTTCTTCAAGTGAAGTGAAACTAAAACCATTGCATTGGGATAAGGTGAATACTAATCTTGATCACTCTATGGTGTGGGATAAAATCGACCGCGGTTCATTCAGGGTTGATGATGGTCTTATGGAGGCTCTATTCGGGTATGTTGCGGCCAAACCAAATAGTAACACTTCAAAAGGAAATGAATCAACAAGTCCAAGCAAGGATGCATCAACAAATGCTTTCATTCTTGATCCTAGAAAATCTCAAAACACTGCTATAGTTTTGAAATCTCTTGCAGTCTCGCGAAAAGAAATCGTCGATGCACTCATCGATGGCCAAGGCCTTAATGCAGATACAATTGAAAAGCTTTCAAGAATCGCTCCAACAGAAGAAGAACAATCTCACATACTCGAATATGAAGGAGACACAACGAAACTTGCAGCAGCTGAATCTTTCTTGTACCACATCCTCAAAGCTGTTCCTTCGGCATTTAAGCGCTTGAATGCGATTTTATTCAGGTTGAATTATGACTCGGAGATCAAAGAAATCAGGGAGATTCTACAGACACTTGAGATGGCGTGTAAGGAGCTTCGAAACCAGGGAGTTTTCGTGAAACTCCTTGAAGCAGTTCTTAAGGCCGGAAACCGCATGAATGCAGGTACTAATAGAGGTAATGCTCAAGCTTTCAACTTGGTTTCTTTAAGGAAACTCTCTGATGTGAAGAGTGTTGATGGAAAAACCACATTGCTACACTTTGTGGTCGAAGAAGTAGTTCGTTCCGAAGGGAAACGCGCGGTTCTTAACCGGAATCATAGTTTGACTCGTAGTTTCAGCAGGAGCAGTAGCAGCAGCAGCATCGGAGACTCTAACAATTCCTCTACCTCGAATGAACAAAAACTGATGGAATATATAAAACTAGGATTACCAATTGTAGGAGGGGTCAGTGCCGAGTTTTCCAATGCAAAGAAAATTGCTTCAACGGATTACAATAGTTTTGCCGCTTCTATCTCGACACTCTCTGCAAAGATAGTTGAAATTCGACAACTTGTTTCGCAGTGCGGAAATGATAAAGGAGGGAAGTTTGTGAGAGAGATGAACCGTTTTCTTGAAAATTCTGAGAAGGATTTGCAATTGGTGAGGGAAGAACAAACAAGGATTATGCAGCTTGTTAAGAGAACAACAGATTATTATCAAGGAGGAGGTTCAAAAGACAGTGCAGGAGAACAGGCTCTTTATCTATTTGTCATAGTCAAGGATTTTCTCGGAATGGTCGATCAAGCGTGTATCGAGATTGCGCGTAACATGCAGAAAAAGAAGACATCTAAGGCAAAGTTCTAA	1986	0.4099	MEGNIKGLIVDEDGLDVVYWRKLQDQNFDKDMKKGVFLNSPRNKDHEDDQRKNNQETHLLRGKSSTSHMNIFPQESSYTIMKITPPAPPPPIQPFSLNLLPSSPKKLSTFFSSIPNVTNHAPPMVSDDTKSQEPPPPPPPPPPSVVPDRKSSAPPPPPPPPPILDRKTLATPPPPPPPPSLSTRKISTPAPPPPPKTSGLKLKSSSKPPPTPLETKSANNKQGSSSSEVKLKPLHWDKVNTNLDHSMVWDKIDRGSFRVDDGLMEALFGYVAAKPNSNTSKGNESTSPSKDASTNAFILDPRKSQNTAIVLKSLAVSRKEIVDALIDGQGLNADTIEKLSRIAPTEEEQSHILEYEGDTTKLAAAESFLYHILKAVPSAFKRLNAILFRLNYDSEIKEIREILQTLEMACKELRNQGVFVKLLEAVLKAGNRMNAGTNRGNAQAFNLVSLRKLSDVKSVDGKTTLLHFVVEEVVRSEGKRAVLNRNHSLTRSFSRSSSSSSIGDSNNSSTSNEQKLMEYIKLGLPIVGGVSAEFSNAKKIASTDYNSFAASISTLSAKIVEIRQLVSQCGNDKGGKFVREMNRFLENSEKDLQLVREEQTRIMQLVKRTTDYYQGGGSKDSAGEQALYLFVIVKDFLGMVDQACIEIARNMQKKKTSKAKF*	662

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa2g2594	661	MobiDBLite	consensus disorder prediction	172	232	-	-
	Psa2g2594	661	MobiDBLite	consensus disorder prediction	172	198	-	-
	Psa2g2594	661	MobiDBLite	consensus disorder prediction	129	158	-	-
	Psa2g2594	661	Gene3D	Formin, FH2 domain	215	652	IPR042201	-
	Psa2g2594	661	MobiDBLite	consensus disorder prediction	124	158	-	-
	Psa2g2594	661	Pfam	Formin Homology 2 Domain	226	640	IPR015425	-
	Psa2g2594	661	Coils	Coil	578	598	-	-
	Psa2g2594	661	PANTHER	FORMIN-RELATED	2	658	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Psa2g2594	661	PANTHER	FORMIN-LIKE PROTEIN 4	2	658	-	-
	Psa2g2594	661	MobiDBLite	consensus disorder prediction	39	58	-	-
	Psa2g2594	661	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	234	657	-	-
	Psa2g2594	661	SMART	it6_source	221	655	IPR015425	-
	Psa2g2594	661	MobiDBLite	consensus disorder prediction	39	71	-	-
	Psa2g2594	661	Coils	Coil	396	416	-	-
	Psa2g2594	661	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	221	661	IPR015425	-
	Psa2g2594	661	MobiDBLite	consensus disorder prediction	199	229	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa2g2594	Psa-Chr2	298749364	298752438	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa2g2594	3	93	FH2 protein (formin) Gene Family	AT1G70140	37.624	6.95e-10	60.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa2g2594	-		-	gmx:100780368	802.357