Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa2g2582 | ATGGGAGGAACAGGTGCTAAGAAACCAACTGTGGATTTTGATTATGCTTTGGAATATGTTATTAAGGTGAAGACTCGATTTGATCGTCCTTATCACCATCATGTTTATCCATTGTTTCTGGACATTCTGGACTCGTTTAAAGAAAATGAAAAGAGTCTTGACGATGTCATTAAAGAGGTTAATTTGCTTTTCAAAGGCCATGATGATCTAATTGATGAGTTTACTAATTTTCTTCCTTGA | 240 | 0.35 | MGGTGAKKPTVDFDYALEYVIKVKTRFDRPYHHHVYPLFLDILDSFKENEKSLDDVIKEVNLLFKGHDDLIDEFTNFLP* | 80 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa2g2582 | 79 | PANTHER | SIN3B-RELATED | 8 | 79 | IPR039774 | GO:0003714 | |
Psa2g2582 | 79 | PANTHER | SIN3A, ISOFORM G | 8 | 79 | - | - | |
Psa2g2582 | 79 | SUPERFAMILY | PAH2 domain | 6 | 79 | IPR036600 | GO:0006355 | |
Psa2g2582 | 79 | Gene3D | Paired amphipathic helix | 15 | 79 | IPR036600 | GO:0006355 | |
Psa2g2582 | 79 | Pfam | Paired amphipathic helix repeat | 35 | 78 | IPR003822 | GO:0006355 | |
Psa2g2582 | 79 | ProSiteProfiles | PAH domain profile. | 7 | 79 | IPR003822 | GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa2g2582 | Psa-Chr2 | 296991540 | 296992265 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Psa2g2582 | PAH | 7.7e-13 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa2g2582 | K11644 | - | mtr:MTR_5g036820 | 82.0333 |