Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2582 ATGGGAGGAACAGGTGCTAAGAAACCAACTGTGGATTTTGATTATGCTTTGGAATATGTTATTAAGGTGAAGACTCGATTTGATCGTCCTTATCACCATCATGTTTATCCATTGTTTCTGGACATTCTGGACTCGTTTAAAGAAAATGAAAAGAGTCTTGACGATGTCATTAAAGAGGTTAATTTGCTTTTCAAAGGCCATGATGATCTAATTGATGAGTTTACTAATTTTCTTCCTTGA 240 0.35 MGGTGAKKPTVDFDYALEYVIKVKTRFDRPYHHHVYPLFLDILDSFKENEKSLDDVIKEVNLLFKGHDDLIDEFTNFLP* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2582 79 PANTHER SIN3B-RELATED 8 79 IPR039774 GO:0003714
Psa2g2582 79 PANTHER SIN3A, ISOFORM G 8 79 - -
Psa2g2582 79 SUPERFAMILY PAH2 domain 6 79 IPR036600 GO:0006355
Psa2g2582 79 Gene3D Paired amphipathic helix 15 79 IPR036600 GO:0006355
Psa2g2582 79 Pfam Paired amphipathic helix repeat 35 78 IPR003822 GO:0006355
Psa2g2582 79 ProSiteProfiles PAH domain profile. 7 79 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2582 Psa-Chr2 296991540 296992265 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa2g2582 PAH 7.7e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2582 K11644 - mtr:MTR_5g036820 82.0333