Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2572 ATGTATAGTGCATGTTTAAACCTAAGAGATTACTATAAAAGGAACATATATTCATACCAACTAATCAACCCAATTCAACCTCAAAAAAATATTTCTTTCATTTATCTAAGAGAGATTATGGAAAAGGAAATGTGTGATATTTCTGTTGAGAAAAGGCTTAGACTATTTGGTTTTGAGCTAAATCCGATAAAGAATAATATTGAAGGACTTGTCAAAGAGTCTAATGAAGGAGATGAAAGTGTGAATTCCTCTAATTCTTTTTCATCCGGAGAGAAAATTGTGCAAGAAAAAGTTTCATCTAGAGACCAACAAGATGAGAGAAAATTTGAGTGTCAATATTGTTTAAAAGAATTTGCAAACTCACAAGCATTAGGGGGTCATCAAAATGCACACAAGAAAGAAAGAATGAAGAAAAAAAGATTGCAACTTCAAGCTAGAAAAGCTAGCATAAACTATTATTTACAACCTTTTCAAAAGAACCACCATGGTTTTTCTTCTTATCATGGTTCTTCTGATACTCATTGGTTTTATGACCCTTCTTCTTATAACAACTCTGATTTCTCTTTGTGTGAAGAGTCTCAAATTAGTTTCAAGTCAAAGAATGTTCATGATGCCAATTCTTGGTATTCTTTGCCTTCTCATCATCATGTTCCTACCTCTCAACAAGATACTTGCATGTTCACTTTCTCTAATAATGATGTTAGGCCTTTCATTTTGGATCCTTCCTCAAACCAAAGTCATAGTAAAGCTTTAGATCTTCAATTAGGTCTCAACTTGGAGTCAAATTCAAGAGGCTCTTTGAAAAGGATATAG 813 0.3272 MYSACLNLRDYYKRNIYSYQLINPIQPQKNISFIYLREIMEKEMCDISVEKRLRLFGFELNPIKNNIEGLVKESNEGDESVNSSNSFSSGEKIVQEKVSSRDQQDERKFECQYCLKEFANSQALGGHQNAHKKERMKKKRLQLQARKASINYYLQPFQKNHHGFSSYHGSSDTHWFYDPSSYNNSDFSLCEESQISFKSKNVHDANSWYSLPSHHHVPTSQQDTCMFTFSNNDVRPFILDPSSNQSHSKALDLQLGLNLESNSRGSLKRI* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2572 270 Pfam C2H2-type zinc finger 109 134 - -
Psa2g2572 270 PANTHER ZINC FINGER PROTEIN 5 42 259 - -
Psa2g2572 270 PANTHER ZINC FINGER PROTEIN 5 42 259 IPR044299 GO:0010090
Psa2g2572 270 ProSitePatterns Zinc finger C2H2 type domain signature. 111 131 IPR013087 -
Psa2g2572 270 SUPERFAMILY beta-beta-alpha zinc fingers 105 136 IPR036236 -
Psa2g2572 270 ProSiteProfiles Zinc finger C2H2 type domain profile. 109 136 IPR013087 -
Psa2g2572 270 MobiDBLite consensus disorder prediction 76 94 - -
Psa2g2572 270 MobiDBLite consensus disorder prediction 73 101 - -
Psa2g2572 270 Gene3D Classic Zinc Finger 81 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2572 Psa-Chr2 295345055 295346420 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2572 48 152 C2H2 Transcription Factor Family AT1G68360 40.678 2.94e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2572 - - gmx:100799857 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2572 2 295345055 295346420 Psa2g2572 2 295345055 295346420 ECH