Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2567 ATGGAAGAGTGTACCAAAAAGGCCATAGAGTTTCTCGATGATGTAATGGGTAGATTAGGTGAAGATAAGTATGATGAGTTTGAAATGTTCTTAATGGATTATGATGCAAAAAGGATTGAGATTACCGATTTCATAGAAAACGTGAAGGAAATATTTGAAGGTGATAGAGATTTGTTATTGAAATTTAACATTTTCATACCAACTGAATATGAAATTAAGCTTCCATTGGAGGGTGAACGATCTCAACCAAAGAAGCATGTCACAATGGAAGATGCCACAAGATTTTTGAATAAGATAAAGGCTCAATTAGAACGAGTTGATAATCATACTTACAAATCATTTATGAGCATATTAACTATGTATCATAACAAACAGAAGTCTTTCACTATGGTCTGCCAAGAGGTTATTACACTATTGCAAGGCCATCCCGAACTTCTTAATGAATTTTATGAGTTTCTTCCAAAAGCCGTTTCTGATCATTATATTGGTGCTCGGAATTGTGCGCGTGGAGATAAATAG 519 0.343 MEECTKKAIEFLDDVMGRLGEDKYDEFEMFLMDYDAKRIEITDFIENVKEIFEGDRDLLLKFNIFIPTEYEIKLPLEGERSQPKKHVTMEDATRFLNKIKAQLERVDNHTYKSFMSILTMYHNKQKSFTMVCQEVITLLQGHPELLNEFYEFLPKAVSDHYIGARNCARGDK* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2567 172 ProSiteProfiles PAH domain profile. 85 156 IPR003822 GO:0006355
Psa2g2567 172 SUPERFAMILY PAH2 domain 83 155 IPR036600 GO:0006355
Psa2g2567 172 Pfam Paired amphipathic helix repeat 22 65 IPR003822 GO:0006355
Psa2g2567 172 Pfam Paired amphipathic helix repeat 109 153 IPR003822 GO:0006355
Psa2g2567 172 Gene3D Paired amphipathic helix 7 67 IPR036600 GO:0006355
Psa2g2567 172 SUPERFAMILY PAH2 domain 7 70 IPR036600 GO:0006355
Psa2g2567 172 ProSiteProfiles PAH domain profile. 1 69 IPR003822 GO:0006355
Psa2g2567 172 PANTHER SIN3B-RELATED 4 156 IPR039774 GO:0003714
Psa2g2567 172 Gene3D Paired amphipathic helix 84 157 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2567 Psa-Chr2 294611314 294612773 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2567 5 74 WRKY Transcription Factor Family AT4G12020 32.394 5.89e-06 43.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa2g2567 PAH 1.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2567 K11644 - gmx:100811928 144.821