Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2547 ATGGCTAATGGAAGCTTAGACAAGTACTTGTTTGAAAAGATAAAGATTGTGTTAAGTTGGGAACAAAGGTTCAAGATAATAAAGGATGTTGCTTCAGGACTTTTATATCTACATGAAGGCTATGAGCATATGGTAATACACAGGGATGTTAAGGCTAGCAAAGGAAGATTAGGTGATTTCGATTTGGCAAGATTATATGAACATGGTGCTAATCCAGGGACCACAAAAGTGGTAGGAACCTTAGGCTATTTAGCACCAGAGTTACCTAGAACAGGAAAATCATCTACAAGTTGTGATGTTTTTGCATTTGGTGCATTTCTGCTTGAGTTTGATGAAAGTGAGGTAATGATGGTGTTGAAATTGGGATTGATATGTTCAAATGATGTTCCTATTATAAGGCCTAGTATGAGACAAGTAGTGAGGATTTTGGATGGAGAAGTTGAGTTTCATGATGACAAGTTGAGAAAGCCAGGAGGTATTGATCAAGATAAGGGGTTTGATGAATTTTCGCACTCTCTTGCATTTTCCTCAAATGATATTCGGAGTTCAAGCTCTTATCTTGGAAATACAGACAGTGATACTTGTTATATCTCTTTTCCTAGTTCACCTCAATCACTTCTCAATCCTAGAGGAGAAACAAGATACCATAGAGTTTATCAAAAATCTTTTGAATAG 675 0.3659 MANGSLDKYLFEKIKIVLSWEQRFKIIKDVASGLLYLHEGYEHMVIHRDVKASKGRLGDFDLARLYEHGANPGTTKVVGTLGYLAPELPRTGKSSTSCDVFAFGAFLLEFDESEVMMVLKLGLICSNDVPIIRPSMRQVVRILDGEVEFHDDKLRKPGGIDQDKGFDEFSHSLAFSSNDIRSSSSYLGNTDSDTCYISFPSSPQSLLNPRGETRYHRVYQKSFE* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2547 224 PANTHER - 109 196 - -
Psa2g2547 224 PANTHER - 1 109 - -
Psa2g2547 224 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 109 196 - -
Psa2g2547 224 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 1 109 - -
Psa2g2547 224 Gene3D Transferase(Phosphotransferase) domain 1 1 156 - -
Psa2g2547 224 SUPERFAMILY Protein kinase-like (PK-like) 1 143 IPR011009 -
Psa2g2547 224 Pfam Protein kinase domain 2 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g2547 224 ProSiteProfiles Protein kinase domain profile. 1 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2547 Psa-Chr2 292973308 292976278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2547 1 210 Receptor kinase-like Gene Family AT3G55550 43.561 3.00e-57 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Psa2g2547 Pkinase 1.4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2547 - - gmx:100784346 286.96