Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2523 ATGGTAACCAGTCGTGCAGATGAAATTAGTCAAATTATCCGTAAACGTATTGAGCAATATAATACCGAAGTAAAAATTGTAAATACAGGTACCGTACTTCAAGTAGGAGATGCCATTGCTCGTATTTATGGTCTTGATGACATAATGGCAGGTGAATTAGTAGAATTTAAAGACGGTACCGTAGGCATTGCTTTGAATTTGGAATCAAAAAATGTTGGTGTTGTATTAATGGGTGATGGTTTGATGATACAAGAGGGAAGTTCCGTAAAAGCAACAGGAAGAATTGCTCAGTCACCAGTAAGTGAGGGTTATTTGGGTCGTGTTGTAAATGCCCTAGCTAAACCTATTGACGGTCAAGGAGAAATTTCAACTTCGGAATATCGGTTAATTGAATCTCCCACTCCCGGTATTATTTTCAGACGTTTCGTGTATGAGCCTCTTCAAACAGGACTTATTGTTATTGATTTTATGATCCCTATAGAGCGTGGCCAGCGAGAATTGATTATTGGGGACAAACAAACAGCTATTGGTCAAAAAGCATCTTCTGTGGCTCAAGTAGTAACTACTTTACAAGAAAGAGGAGAAATGGAATACACTATTATAGTGGTTGAAACAGCAAATTCCCCAGCTACATTACAATACCTCGCGCCTTATACAGGAGCAGCTCTGGCTGGATATTTTATGTACCGTGAACGTCACACTTTAATTATTTATGATGATCCCTCCAAACAAACACAGGCTTATCGCCAAATGTCTCTTCTATTACAAAGACCACCAGGCCGCGAAGCTTATCCTGGAGATGTTTTTTATTTACATTCGTGTCTTTTGGAAAGAGCCGCTAAATTAAGTTCTCAGTTAGGTGAAGGAAGTATGACTGCTTTACCAATAATTGAGACCCAATCCGGAGATGTTTCAGCTTATATTCCTACTAATGTCATTTCCATTACAGATGGTCAAATATTCTTATCTGTCGATTTATTCAATGCTGGGATCAGACCCGCAATTAATCACAATGGTCAAATATTCTTATCTGCCGATTTATTCAATGCTGGGATCAGACCCGCAATTAATGTGGGTATTTCCGTTTCCAGAGTTGGATCGGCGGCTCAAATAAAAGCCATGAAACAAGTAGCTGGTAAATTTAAATTGGAATTAGCACAATTCGCAGAATTAGAAGCTTTTGCACAATTCTCTTCCGATCTCGATAAAGCTACGCAAAATCAATTGGCAAGAGGTCAACGATTGCGCGAGTTGCTTAAACAATCCCAATCGGCTCCTCTTACTGTGGAAGAACAGATAATAACTATTTATACTGGAACGAATAGTTATCTTGATTCAGTAGAAATTGCACAGGTAAGGAAATTTATCGTTGAGTTACGGGCTTATTTAAAAACGAAGAAACCAAAATTCAACGAAATCATATCTTCTACCAAGACATTCACTGGGGAAGCAGAAGCCATTTTGAAGGAAGCTATTCAGGAACAGATGGAACTCTTTTGA 1500 0.386 MVTSRADEISQIIRKRIEQYNTEVKIVNTGTVLQVGDAIARIYGLDDIMAGELVEFKDGTVGIALNLESKNVGVVLMGDGLMIQEGSSVKATGRIAQSPVSEGYLGRVVNALAKPIDGQGEISTSEYRLIESPTPGIIFRRFVYEPLQTGLIVIDFMIPIERGQRELIIGDKQTAIGQKASSVAQVVTTLQERGEMEYTIIVVETANSPATLQYLAPYTGAALAGYFMYRERHTLIIYDDPSKQTQAYRQMSLLLQRPPGREAYPGDVFYLHSCLLERAAKLSSQLGEGSMTALPIIETQSGDVSAYIPTNVISITDGQIFLSVDLFNAGIRPAINHNGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKFKLELAQFAELEAFAQFSSDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIITIYTGTNSYLDSVEIAQVRKFIVELRAYLKTKKPKFNEIISSTKTFTGEAEAILKEAIQEQMELF* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2523 499 Gene3D - 371 499 IPR038376 -
Psa2g2523 499 Gene3D - 3 94 IPR023366 -
Psa2g2523 499 Hamap ATP synthase subunit alpha [atpA]. 2 499 IPR005294 GO:0015986|GO:0045261|GO:0046933
Psa2g2523 499 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 11 95 IPR036121 GO:0046034|GO:1902600
Psa2g2523 499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 338 369 IPR027417 -
Psa2g2523 499 Gene3D - 339 370 IPR027417 -
Psa2g2523 499 Gene3D - 95 174 IPR027417 -
Psa2g2523 499 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 338 499 - -
Psa2g2523 499 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 1 175 - -
Psa2g2523 499 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 175 336 - -
Psa2g2523 499 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 371 497 - -
Psa2g2523 499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 337 IPR027417 -
Psa2g2523 499 CDD ATP-synt_F1_alpha_C 374 499 IPR000793 GO:0015986
Psa2g2523 499 Pfam ATP synthase alpha/beta family, beta-barrel domain 29 93 IPR004100 GO:0046034|GO:1902600
Psa2g2523 499 PANTHER ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC 1 175 - -
Psa2g2523 499 PANTHER ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC 175 336 - -
Psa2g2523 499 PANTHER ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC 338 499 - -
Psa2g2523 499 Gene3D - 175 338 - -
Psa2g2523 499 Pfam ATP synthase alpha/beta chain, C terminal domain 370 494 IPR000793 GO:0015986
Psa2g2523 499 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 175 337 IPR000194 GO:0005524
Psa2g2523 499 ProSitePatterns ATP synthase alpha and beta subunits signature. 354 363 IPR020003 GO:0005524
Psa2g2523 499 CDD ATP-synt_F1_alpha_N 28 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2523 Psa-Chr2 291555479 291557132 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2523 61 336 Primary Pumps ATPases(2) AT1G20260 27.660 1.80e-23 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2523 K02111 - gmx:3989298 791.571