Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2476 ATGCACTTGAAACAAATTATATACATCATGTCTCCAACGCTGATGAGAATTATTGCTCATTTCTCACTTGTTTTACTGCTAGTAGCTGTATCAGAAGCAGCTATCTTTCCCCATCGAGTGGACATAGAGCTCCTCAACAAATTATCTGATAACAAAAAGCTAACCATTCATTGCTACGAAAGATATGGCGAAGATCTAGGCGAGTTAATACTCCCACCCGGCGGGAAACTCAACTTTGCATTCAGGCCAAGAGTAGTTGGAAAATCGAGTAAGTATTATTGTAGCCTTAAATGGGATGGTTCCAACCTCAAATGGTTTGATATGTGGTCACAAGGAAGGGATTATAATGCATGCAGACTTTGCAAATGGATCGTAAATGAGAAAGAAGCTTGTAGGTTTGATTATGGTTCAGGAGCTTATTCTGTTTGTGTTGTCTATAATCAATGA 447 0.3893 MHLKQIIYIMSPTLMRIIAHFSLVLLLVAVSEAAIFPHRVDIELLNKLSDNKKLTIHCYERYGEDLGELILPPGGKLNFAFRPRVVGKSSKYYCSLKWDGSNLKWFDMWSQGRDYNACRLCKWIVNEKEACRFDYGSGAYSVCVVYNQ* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2476 148 PANTHER S-PROTEIN HOMOLOG 18-RELATED 25 139 - -
Psa2g2476 148 Pfam Plant self-incompatibility protein S1 42 144 IPR010264 -
Psa2g2476 148 PANTHER - 25 139 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2476 Psa-Chr2 285980791 285981525 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2476 39 148 Carbohydrate Esterase AT3G16970 30.702 8.25e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2476 - K01880 cam:101514770 68.9366