Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2472 ATGTCTCCAATGTTGATGAGAATTGTTGTTCCTATATCACTTGTTTTATTGCTGGTAGTTGTATCTGAAGCAGGAATCTTATCAAATCTGGTGCATATAGAGGTCACCAATGGTTTATCTAATAACAAAAACTTAGACCTTCATTGCTTCGAAAGATATGGTGAAGAGCCAGGCGAGGTTACACTCCCACCTGGCGGGCAATTCAAATTTTCTTTCAGGCGAAGAGTAATTGGTAGATCGACCAAGTTTTATTGTAGTGTTAAGTGGATTGGTTCCAATCTCCTATGGTTTGATTTGTGGTCGCAAGGAAGGGATGGTAATGCGGGCCGATTACTCCGTTGGACCGTAAGAGAGAAGGAGGTTTGTAGGTTTGATGCTGCACGATCTTATTCTGTTTGTGCTGCCTACAGACAAAAATCTATATTTGTACCTTAA 435 0.4069 MSPMLMRIVVPISLVLLLVVVSEAGILSNLVHIEVTNGLSNNKNLDLHCFERYGEEPGEVTLPPGGQFKFSFRRRVIGRSTKFYCSVKWIGSNLLWFDLWSQGRDGNAGRLLRWTVREKEVCRFDAARSYSVCAAYRQKSIFVP* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2472 144 PANTHER - 18 129 IPR010264 -
Psa2g2472 144 PANTHER S-PROTEIN HOMOLOG 18-RELATED 18 129 - -
Psa2g2472 144 Pfam Plant self-incompatibility protein S1 32 128 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2472 Psa-Chr2 285061110 285062002 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2472 24 141 Carbohydrate Esterase AT3G16970 25.203 3.05e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2472 - K03848 bna:111214538 49.6766