Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2464 ATGAATTTCCATTTCAGATCCTCGCGCCGCCAAGCTTACACCGTACATCGATCCACAACCTCACAACAAAAGCGGTTCTACTGTCGCCGATTGTCGTCGCGTCGGAGTTCCATTCCGGTAAGACGCAACGGTCTCGGCGATTCCGTCGTGGCTGTGGATAAGGTTCCTTGTTGTTTGGTTGTGTGTTTCGTCGGACAGCCAATGGTTTATTGTGAGGCGAAGGAAGGGGGTTTTCGGCGGATGAGGTTTCGTGGAGGGAGCTCGTCGGTAGTGATGTTGTTGTTCGACGGCTTTGGTTTGTGGGGTTGTCGGAAAGAAGAAGAGCAAGGAGGAGTGCGTGATTTCGCGGTGTTGAGATGGTGTTCCACGGCGGATGGGAAGAATGGTTTTTGGTTGGATTTAAAGAGGAAGATGGAGGGAGCTCGTCGGAAAAACAATGGTAGCGGAAGGAGTTCGTCGGCGGTGTGGATCAAGATCTCGCGGTTGTTGTGGAGGGATATGGATGGTGAAGGGAGGCGCGGTGCTTGTGTGATTGCCGGCGGAGACGCGGTTTCCGGCAATTCAACGAAGGGTGAAAGAGAGATGAACAGTGGTGACACACTGATGAAATCAGCAACTAAAGATGGAATGAGTATTTTCATTTTCACCGTTTACTCAAACCTTTTTGCTCTATGCTTTCTTCTACCATCTTCACTTTTCTACCATAGGAAAAGAGCTCCTCCTCCTATTTCAACATCAATTTTCTGCAGAATATTTCTTCTTAGTTGCATCCAAACTTCAGTGCAGATTTTAATGAATACTGGAATTGGATATAGCTCTCCCACTTTGGCATCGACTATGGTTGATCTTGTCCCTGCTTTTACCTTCATACTTGCTTTGATTTCAAGGATGGAAATTCTAAATTTGAAACAGCATAGTAGTCAGATAAAAGTTATATGTACAATGGTCTGCATTGCAGGGGCATTAACTGTGACATTATATAAAGGGATGCCATTGATTAGTAATGCCTTTCCAAATATAGAAATGGGAGGTCGTGGAATTAACATCTCAGAAAAATCAAATTGGATAACTGGGGCTATTCTTCTTGCAACCGCTAGCTTTTGCCTTTCAGTTTTACATATAGTTCAGACTTGGATTATCAAGGAATATCAAGAAGAGCTAGTGGTAACAACTATTTGCTGCATTTTTGTGGTAATCCTATCTTCCTTTGTAGCTCTCATTTCAGAGGGTATTTCAAAAGCTTGGATACTTAGACCTGATAAGGAGTTTGTATCTATATGTTTCTCAGCAATATTTGTTGTGTCAACGAGGAATGTTGTAACTATATGGGCATGTCGTAAGAAAGGACCAATATATGTAGCTATATTCAAACCTTTAAGAGTTGTCATTGCACTTGGCATGGGAGTAATATTCTTGGGAGATAATCTTTATCTTGGAAGCATGATTGGAGCTGCTATTATAATTACTGGATTTTATGGTGTAATATGGGCACAGGGTCAAGAGAAACTCATGACAAGTGAAAATAACATTCTCCCATCTTCTTCAACGCCTCTTTTGTCAAACAAAAGCATGGATATATAG 1581 0.425 MNFHFRSSRRQAYTVHRSTTSQQKRFYCRRLSSRRSSIPVRRNGLGDSVVAVDKVPCCLVVCFVGQPMVYCEAKEGGFRRMRFRGGSSSVVMLLFDGFGLWGCRKEEEQGGVRDFAVLRWCSTADGKNGFWLDLKRKMEGARRKNNGSGRSSSAVWIKISRLLWRDMDGEGRRGACVIAGGDAVSGNSTKGEREMNSGDTLMKSATKDGMSIFIFTVYSNLFALCFLLPSSLFYHRKRAPPPISTSIFCRIFLLSCIQTSVQILMNTGIGYSSPTLASTMVDLVPAFTFILALISRMEILNLKQHSSQIKVICTMVCIAGALTVTLYKGMPLISNAFPNIEMGGRGINISEKSNWITGAILLATASFCLSVLHIVQTWIIKEYQEELVVTTICCIFVVILSSFVALISEGISKAWILRPDKEFVSICFSAIFVVSTRNVVTIWACRKKGPIYVAIFKPLRVVIALGMGVIFLGDNLYLGSMIGAAIIITGFYGVIWAQGQEKLMTSENNILPSSSTPLLSNKSMDI* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2464 526 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 328 - -
Psa2g2464 526 Pfam EamA-like transporter family 357 495 IPR000620 GO:0016020|GO:0016021
Psa2g2464 526 Pfam EamA-like transporter family 207 322 IPR000620 GO:0016020|GO:0016021
Psa2g2464 526 SUPERFAMILY Multidrug resistance efflux transporter EmrE 414 499 - -
Psa2g2464 526 PANTHER WAT1-RELATED PROTEIN 199 500 IPR030184 GO:0016021|GO:0022857
Psa2g2464 526 PANTHER WAT1-RELATED PROTEIN 199 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2464 Psa-Chr2 282498079 282517719 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2464 199 509 Nodulin-like Gene Family AT3G28050 43.590 5.15e-73 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2464 - - gmx:100793168 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2464 2 282498079 282517719 Psa2g2464 2 282498079 282517719 ECH