Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2372 ATGACACCCCCCAAGAAATCTCAAATGAAAGGAGATGTGCATTACTATGTAGAGTCACCAGGTTTTGGTTATAGTAATAGGAACCATTTAGTTGCAATGCAACATATGAGAACTCCTTCAGACCCAACACAACAACAAATGAATACTGGCCAAATATTTTTTAGTTATGAACAGATTGTGGAAATTACTAATGAGTTTTCAAGCGAAAATGTGATAGGAGAAGGGGGTTTTGGGCGTGTTTACAAGGCTTCCATGCCTGATGGTAGAGTTGGAGCGGTTAAGCTATTGAAGGTCGGTAGTGGTCAAGGAGAGAGGGAGTTCAGAGCAGAGGTTGATATTATTAGTCGTGTTCATCATCGACATTTGGTATCGTTGATTGGTTATTGTTTATCTGAGCAACAAAGAGCTCTTATATATGAGTTTGTTCCTAATGGGAATCTTGATCAACATGTGCATGAAAGTGAATGGAATGTTTTGGATTGGTCCAAAAGGATGAAGATAGCAATTGGTGCTGCAAGGGGCCTGGCATATTTACACGAAGGATGCAACCCAAAGATCATTCACAGAGATATTAAGTCATCAAATATACTGTTGGATAATGCTTATGAGGCACAAGTTGCAGACTTTGGACTCGCCCGACTAACCGATGATGCTAACACTCATGTATCAACTAGAGTGATGGGTACTTTTGGCTATATGGCACCAGAGTATGCAACGAGTGGAAAACTAACGGATAGATCAGATGTTTTCTCATTTGGAGTTGTTCTTCTTGAGCTCATAACCGGAAGGAAACCTGTTGATGCAACACAACCCGTGGGGGAGGAGAGTTTGGTTGAGTGGGCTCGTCCGCTTCTCCTCCGTGCAATCAAGACAGGTGATTTTAGTGAACTAGCAGACTCAAGGCTTCAACGACAATACGTCGACAGTGAAATGTTTAGAATGATCGAGGCAGCTGCAGCATGTGTTCGTCATTCTGCCCCAAAACGACCGCGAATGGTTCAGATTGCAAGAGCCTTGGACAGTGGAGATCAACAATATGATCTATCAAATGGGGTGAAATATGGTCAGAGCAGAATTTATGATTCTGGACAGTATAATGAAGACCTTATGAGATTCAAAAGAATGGCTAATGGAAGTTTTGATGAGTCTGAATTCGATATGTATAGCTCCGAATACAGTTCAAGAGACATGCCTAGTGGATCTGCATGGATCCCACAGTCTCCAAGTGGTGATTCGCAGATTAAACCTGTTCAAGAATAA 1260 0.4183 MTPPKKSQMKGDVHYYVESPGFGYSNRNHLVAMQHMRTPSDPTQQQMNTGQIFFSYEQIVEITNEFSSENVIGEGGFGRVYKASMPDGRVGAVKLLKVGSGQGEREFRAEVDIISRVHHRHLVSLIGYCLSEQQRALIYEFVPNGNLDQHVHESEWNVLDWSKRMKIAIGAARGLAYLHEGCNPKIIHRDIKSSNILLDNAYEAQVADFGLARLTDDANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDATQPVGEESLVEWARPLLLRAIKTGDFSELADSRLQRQYVDSEMFRMIEAAAACVRHSAPKRPRMVQIARALDSGDQQYDLSNGVKYGQSRIYDSGQYNEDLMRFKRMANGSFDESEFDMYSSEYSSRDMPSGSAWIPQSPSGDSQIKPVQE* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2372 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Psa2g2372 419 CDD STKc_IRAK 72 340 - -
Psa2g2372 419 ProSiteProfiles Protein kinase domain profile. 66 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g2372 419 PANTHER RECEPTOR-LIKE KINASE 1 402 - -
Psa2g2372 419 Pfam Protein tyrosine and serine/threonine kinase 69 338 IPR001245 GO:0004672|GO:0006468
Psa2g2372 419 Gene3D Transferase(Phosphotransferase) domain 1 142 359 - -
Psa2g2372 419 SMART serkin_6 66 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g2372 419 SUPERFAMILY Protein kinase-like (PK-like) 41 339 IPR011009 -
Psa2g2372 419 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 402 - -
Psa2g2372 419 MobiDBLite consensus disorder prediction 389 419 - -
Psa2g2372 419 Gene3D Phosphorylase Kinase; domain 1 27 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2372 Psa-Chr2 273249596 273252569 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2372 3 401 Trihelix Transcription Factor Family AT1G70460 61.687 0.0 527
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Psa2g2372 PK_Tyr_Ser-Thr 7.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2372 - - lja:Lj2g3v1414850.1 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2372 2 273249596 273252569 Psa2g2372 2 273249596 273252569 ECH