Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa2g2356 | ATGAAGAAAGCAATCCCTCTCATTTTCTCTCAATGTCTCACACACCTTCTCATCACGTTTGCATTACTATCACAAACTGTAATGGCAGAATCAAGAGCCAAGACAGTTCTGGTAACATGTGGTTCTCAACTAGAGCACAACACAACCATCTTCGTTCCGAATTTTGTCGCAACTATGGAGAAGATCAGCGAGCAGATGCGTAGTACCGGCTTCGGCAAAGCAGTTACAGGGACAGGACTTGATACTAACTATGGCCTAGCACAATGCTATGGAGATCTTTCATTACTTGACTGTGTCTTGTGTTATGCCGAGGCACGCACAGTTCTTCCACAGTGCTTCCCTTATAACTCCGGTCGCATTTACCTCGACGGTTGTTTCATGAGGTCTGAGAATTATAGTTTCTTTAATGAATATAAAGGACCGGGAGATAGAGCTGTGTGTGGGAACACGACTAAGAAGAACTCGGATTTTCAAGCAGCGGCGAAGCAAGCAGTGTTAACAGCAGTTCAAGATGCAGTGAAAAATAAAGGCTATGCCAGAGGAAGAGTTGTTGTATCAGAAGCAGCAAATGAATCTGCTTATGTTCTAGCTGATTGTTGGAGGAATTTAAACTCTCAGTCTTGCAAAGCATGTCTTGAGCACGCATCGTCATCGATATTGGGATGCCTTCCTTCGTCAGAAGGACGGGCACTCAATACCGGATGCTTCATGAGGTACTCCGACACTGATTTTCTTAACAAGGAAGTGGAAAATACGAGTTCACGAGGTAATGTTCTAGTAATAGTCGTTGCAGTAGTCAGTTCCGTGATCGTTGCGGTGGTTGGAGTGATTATAGGAGCTTATATCTGGAAACAAAGATACATTCGAAGGAAAAGAAGAGGATCAAATGATGCAGAAAAGTTAGCAAAGACTCTTCAGGAAAAAAGCTTGAATTTCAAGTACTCTACATTGGAAAAAGCTACTGAATCTTTTAATGACAATAACAAGTTAGGGCATGGAGGATTTGGAATGGTTTATAAAGGAGTTCTACCAGATGGAAGAGAGATTGCTATCAAGAGGTTATATTTCAACAACAGACACAGGGCAGCAGATTTCTACAATGAAGTCAACATAATTAGCGGTGTCGAACACAAGAATCTAGTTAGACTATTAGGATGCAGTTGTTCAGGACCTGAAAGCCTGCTTGTATACGAATATATGCCCAACAAAAGTCTCGATCGCTTCATTTTTGATAAAAACAAGGGCAGAGAACTAACATGGGGAAAGAGAAATGAAATAATTATTGGGACAGCTGAAGGATTAGTTTACCTGCATGAGAACTCCAAAATCAGGATAATTCATAGAGATATAAAAGCCAGCAACATCCTATTGGACTCAAAGCTTCGAGCTAAAATTGCAGATTTTGGTTTGGCCAGGTCCTTTCAAGAAGACAAGAGCCACATAAGTACAGCTATTGCAGGAACCTTGGGGTATATGGCTCCAGAGTATCTAGCTCATGGTCAATTAACAGAAAAAGCAGACGTATACAGTTTCGGAGTGTTACTGCTAGAGATAGTTACTGGAAGACAGAACAACAGGAGCAAAGCATTAGAATATTCAGACAGCTTAGTTATAGTGGCATGGAAGCATTTTCAGTCAGGGGCTTCTGAAGAACTATTTGATCCAAATATAGAGTTGCACGATGATCACAATAGTAGTGATGTTAAGAATGAGCTTTTAAGAGTGGTTCACATAGGACTTCTATGCACTCAAGAGGTCCCTTCATTACGACCAACTATGTCAAAGGCATTACAGATGCTAACGAAGAATGAGGAGCCTCTCATTGCTCCCTCGAATCCGCCCTTCCTAGATGAGAGTACTATGGAACTCCATGACACGAGTGGTGACCCATTTTACCTCCCCAATGCAGCTGATTCAATTGCTACTATGTCGCATAGCTCTTTCTATCCCAGATGA | 1956 | 0.4172 | MKKAIPLIFSQCLTHLLITFALLSQTVMAESRAKTVLVTCGSQLEHNTTIFVPNFVATMEKISEQMRSTGFGKAVTGTGLDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPYNSGRIYLDGCFMRSENYSFFNEYKGPGDRAVCGNTTKKNSDFQAAAKQAVLTAVQDAVKNKGYARGRVVVSEAANESAYVLADCWRNLNSQSCKACLEHASSSILGCLPSSEGRALNTGCFMRYSDTDFLNKEVENTSSRGNVLVIVVAVVSSVIVAVVGVIIGAYIWKQRYIRRKRRGSNDAEKLAKTLQEKSLNFKYSTLEKATESFNDNNKLGHGGFGMVYKGVLPDGREIAIKRLYFNNRHRAADFYNEVNIISGVEHKNLVRLLGCSCSGPESLLVYEYMPNKSLDRFIFDKNKGRELTWGKRNEIIIGTAEGLVYLHENSKIRIIHRDIKASNILLDSKLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEIVTGRQNNRSKALEYSDSLVIVAWKHFQSGASEELFDPNIELHDDHNSSDVKNELLRVVHIGLLCTQEVPSLRPTMSKALQMLTKNEEPLIAPSNPPFLDESTMELHDTSGDPFYLPNAADSIATMSHSSFYPR* | 652 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa2g2356 | 651 | Gene3D | - | 144 | 244 | IPR038408 | - | |
Psa2g2356 | 651 | Gene3D | - | 32 | 134 | IPR038408 | - | |
Psa2g2356 | 651 | ProSiteProfiles | Gnk2-homologous domain profile. | 33 | 134 | IPR002902 | - | |
Psa2g2356 | 651 | Gene3D | Transferase(Phosphotransferase) domain 1 | 400 | 608 | - | - | |
Psa2g2356 | 651 | Gene3D | Phosphorylase Kinase; domain 1 | 285 | 399 | - | - | |
Psa2g2356 | 651 | SUPERFAMILY | Protein kinase-like (PK-like) | 310 | 625 | IPR011009 | - | |
Psa2g2356 | 651 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 445 | 457 | IPR008271 | GO:0004672|GO:0006468 | |
Psa2g2356 | 651 | SMART | serkin_6 | 324 | 607 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa2g2356 | 651 | ProSiteProfiles | Gnk2-homologous domain profile. | 139 | 244 | IPR002902 | - | |
Psa2g2356 | 651 | ProSitePatterns | Protein kinases ATP-binding region signature. | 330 | 352 | IPR017441 | GO:0005524 | |
Psa2g2356 | 651 | CDD | STKc_IRAK | 330 | 602 | - | - | |
Psa2g2356 | 651 | ProSiteProfiles | Protein kinase domain profile. | 324 | 608 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa2g2356 | 651 | Pfam | Salt stress response/antifungal | 147 | 241 | IPR002902 | - | |
Psa2g2356 | 651 | Pfam | Salt stress response/antifungal | 49 | 132 | IPR002902 | - | |
Psa2g2356 | 651 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 9 | 632 | - | - | |
Psa2g2356 | 651 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 | 9 | 632 | - | - | |
Psa2g2356 | 651 | Pfam | Protein kinase domain | 325 | 598 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa2g2356 | Psa-Chr2 | 270817236 | 270819793 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa2g2356 | 1 | 651 | Receptor kinase-like Gene Family | AT1G70520 | 67.228 | 0.0 | 862 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Psa2g2356 | Pkinase | 9.1e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa2g2356 | - | - | gmx:100305420 | 1079.32 |