Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2315 ATGAGTTTTCAAGACTTAGAATCCGGCCGGCGCAACCTAATCAACGGCAAACAAAACCCGACGCAGGCGGTTGCCTCCGGCGTATTTCAGATCAACACCGCCGTCTCCACTTTTCAGAGACTCGTCAACACACTCGGAACCCCCAAAGACACGCCAGAACTCCGCGAGAAACTACACAAGACCAGACTCCACATTGGACAATTGGTGAAGGATACGTCGGATAAACTTAAACAAGCTAGTGAAATTGATCATCATGTTGATGTTGATGCAACCAAGAAGATAGCAGATGCTAAATTGGCCAAAGATTTTCAGGCAGTGTTGAAAGAATTTCAGAAGGCACAGCGTCTTGCAGCCGAGAGGGAGACAGCTTACACTCCTTTTGTTCCGCAAGATGCTCAGCCATCCAGCTATACAGTCAGTGGAGTAGGTGTCAGTTCTGATAAAAGTCAAGAACAGCGTGCCCTTGTGGAATCCAAAAGACAGGAGGTAATATCCTTAGATAATGAGATTTCCTTCAATGAGGCTATCATCGAGGAAAGAGAACAAGGTATTCAAGAAGTCCAGCAGCAGATTGGGGAAGTAAATGAGATCTTCAAGAGATCTTGCTCGTGCTTGTTCATGAGCAAGGAGCAATGA 636 0.4607 MSFQDLESGRRNLINGKQNPTQAVASGVFQINTAVSTFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSDKLKQASEIDHHVDVDATKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYTPFVPQDAQPSSYTVSGVGVSSDKSQEQRALVESKRQEVISLDNEISFNEAIIEEREQGIQEVQQQIGEVNEIFKRSCSCLFMSKEQ* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2315 211 PANTHER SYNTAXIN OF PLANTS PROTEIN 8 200 - -
Psa2g2315 211 SUPERFAMILY t-snare proteins 17 199 IPR010989 GO:0016020|GO:0016192
Psa2g2315 211 Pfam Syntaxin-like protein 25 124 IPR006011 GO:0016020
Psa2g2315 211 Gene3D - 15 128 - -
Psa2g2315 211 CDD SynN 18 135 IPR006011 GO:0016020
Psa2g2315 211 SMART SynN_4 8 122 IPR006011 GO:0016020
Psa2g2315 211 PANTHER SYNTAXIN 8 200 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2315 Psa-Chr2 263472425 263474972 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2315 1 199 SNARE and Associated Proteins AT5G46860 77.451 5.04e-107 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2315 - K08488 gsj:114425559 299.286