Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2303 ATGGTTAACATAGGAAATGGATATTACTATGAGGTTATAAATGCATTTGGGTCATGGCTAGATGATATCAACTACATTTCTGGTTCACAATATGGAACTGTTCTTATCCTGAAAGAGAATACAATTAATATGAATGAGAGTTTTCTCAATTCAAATGACTTTAACTATTCAGCACCACTCGAGTTATACTTGACTGCAAGGACAATGGGAAGCAATGGAGATTCAAACATGAGGTACAATTTAACATGGTCGTTTTTTGTTGATTCTGGATTCAAGTACCTTGTTAGACTTCATTTCTGCGAGATATCTATGTTGGTAACAAAGGTTAATCAGAGGGTGTTTGGTGTTTATATAAACAACCAAACAGCTGAGGAAAATTTGGATTTAGTTGCTTTGTCTGTCGAACCTGTTAGTCCTTTGTATAGAGACTATGTTGGAATGGTTGATTTGGAAAATCAGAGAAGGAAAGTTTTCATGTTGATTTCACTTCATCCCAATTTTGAGTCAAAACCAAAGTATCATGATGCTATATTGAATGGAGTTGAGATTATCAAGTTAAGTGATAGAGAGATCACTTCAGCAACAAATAATTTCAATGAAGATTTGGTGATTGGGGAAGGAGGTTTTGGAAAGGTATACAAGGGAATCGTCGTGCTTGATGGAGTAGTGATTGATGTCGCGATAAAACGTGCTAAGGCGAATTCGCGGCAAGGATTTAAGGAATTTCAAAATGAGATCAATTTTCATTCGTTTTATCACATGAATTTAGTGTCACTTTTGGGATACTGTCAAGAGAGCAATGAACTGATACTTGTGTATGAATACATGGCTGAAGCAGTGAATCCTGAGGCAGTGGAAGAGGAAAATGAGAAAGTTGGTTTGGTAGAATGGGCTATGCATTGTCACCAATGTGGAAGTATTGATAGATTTGTTGATTCATATTTAGAAGGAAAAATAAGGTTGAAATGCTTAATGGCATTTGTGGACATTTGTATTCGGTGCTCTGCTATCAAGAGTGCAGATAGGCCAACTATGGGAGAGATAGAAGACGACTCTCGTGTCTGTACGTGTTGGTGTTTTGACTCTCGTGTGGCCTTTGGCGTTGCGAAGGCCCTTGATGAGAGGGACGCCCTGAAGAAGCAACTGGAAGACTCCAAAACAGAGCACGGGAAAGCTTTGGAGGCTTCCGAGGCAGAGAATGTTAAGGTTTATGACGACCTGACCAAGGCCTTTCAGAGAGAGGGAAAGTTGAGGGATGACCAAAGGGCGTTTTGA 1275 0.3914 MVNIGNGYYYEVINAFGSWLDDINYISGSQYGTVLILKENTINMNESFLNSNDFNYSAPLELYLTARTMGSNGDSNMRYNLTWSFFVDSGFKYLVRLHFCEISMLVTKVNQRVFGVYINNQTAEENLDLVALSVEPVSPLYRDYVGMVDLENQRRKVFMLISLHPNFESKPKYHDAILNGVEIIKLSDREITSATNNFNEDLVIGEGGFGKVYKGIVVLDGVVIDVAIKRAKANSRQGFKEFQNEINFHSFYHMNLVSLLGYCQESNELILVYEYMAEAVNPEAVEEENEKVGLVEWAMHCHQCGSIDRFVDSYLEGKIRLKCLMAFVDICIRCSAIKSADRPTMGEIEDDSRVCTCWCFDSRVAFGVAKALDERDALKKQLEDSKTEHGKALEASEAENVKVYDDLTKAFQREGKLRDDQRAF* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2303 424 ProSitePatterns Protein kinases ATP-binding region signature. 204 229 IPR017441 GO:0005524
Psa2g2303 424 ProSiteProfiles Protein kinase domain profile. 198 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g2303 424 PANTHER OS07G0166700 PROTEIN 282 348 IPR045272 GO:0004714|GO:0006468
Psa2g2303 424 PANTHER OS07G0166700 PROTEIN 190 278 IPR045272 GO:0004714|GO:0006468
Psa2g2303 424 PANTHER OS07G0166700 PROTEIN 1 190 IPR045272 GO:0004714|GO:0006468
Psa2g2303 424 Gene3D - 1 185 - -
Psa2g2303 424 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 190 278 - -
Psa2g2303 424 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 190 - -
Psa2g2303 424 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 282 348 - -
Psa2g2303 424 SMART tyrkin_6 198 360 IPR020635 GO:0004713|GO:0006468
Psa2g2303 424 Gene3D Phosphorylase Kinase; domain 1 186 272 - -
Psa2g2303 424 Coils Coil 368 399 - -
Psa2g2303 424 SUPERFAMILY Protein kinase-like (PK-like) 189 277 IPR011009 -
Psa2g2303 424 Pfam Protein tyrosine and serine/threonine kinase 203 279 IPR001245 GO:0004672|GO:0006468
Psa2g2303 424 Pfam Malectin-like domain 39 185 IPR024788 -
Psa2g2303 424 Gene3D Transferase(Phosphotransferase) domain 1 273 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2303 Psa-Chr2 261380890 261382871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2303 278 348 Receptor kinase-like Gene Family AT3G51550 36.620 2.27e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Psa2g2303 Malectin_like 8.7e-20 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2303 - - mtr:MTR_5g047070 265.003