Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2277 ATGGAGGAGACACTTCTGCTCCTTGAAACATTGGAACTTTATAAAGAAAATTGGAATAAGATTGCAGAACATGTTGGAACAAAATCAAAAGCTCAGTGCATATTGTATTTTGTTCAAAAGCCAATAGAAGATAGCCTTGCTGACTACGATGAAGATGTTGATGCCGGTTACAAAGAAATGGTAGATCCAGTTGCAACAAATAACAAATTGTATGTAGATGAAGATAAAGATAAAGGTGCTTCAGAAGTTATTGAGAATGACACTAATATCAAAGGCCATCATGAGACTTCTCAGGTGGAGGATATTAAAGTGGAAGATAATCAAGAAGCATTTACAGTTGTTGGTTATTCTCTTGAACCTGAAGGTCCGTCGTCACTTGCCGAAGTGGCAATTCCTGTCGTGGCATTGGCAACTTTCCTTGCGCAATTGGTATGTTCTAATGTGGCTTTTGCTTCAGCTCATGACTACATAAAATCCTTGTCTGAAAATGCTCTTGGAACTAAGATTGCTTCAAGGTGTTGCTTTCTTCTAGAAGATCTACCAGATGCTAAGAAGAAATAA 561 0.3779 MEETLLLLETLELYKENWNKIAEHVGTKSKAQCILYFVQKPIEDSLADYDEDVDAGYKEMVDPVATNNKLYVDEDKDKGASEVIENDTNIKGHHETSQVEDIKVEDNQEAFTVVGYSLEPEGPSSLAEVAIPVVALATFLAQLVCSNVAFASAHDYIKSLSENALGTKIASRCCFLLEDLPDAKKK* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2277 186 ProSiteProfiles SANT domain profile. 1 45 IPR017884 -
Psa2g2277 186 PANTHER SWI/SNF COMPLEX-RELATED 2 186 - -
Psa2g2277 186 Pfam Myb-like DNA-binding domain 2 38 IPR001005 -
Psa2g2277 186 CDD SANT 15 39 IPR001005 -
Psa2g2277 186 Gene3D - 1 45 - -
Psa2g2277 186 SUPERFAMILY Homeodomain-like 2 44 IPR009057 -
Psa2g2277 186 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3D 2 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2277 Psa-Chr2 256500758 256501468 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Psa2g2277 Myb_DNA-binding 8.7e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2277 K11649 - gmx:100799723 204.527