Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2216 ATGGAAGGAAAAAAAGATGCAGTTTTGTTTTGTTTTTTGGCTTTGTTCTTCATGTGGACTTCAGTAACTGGTTTGCTTTCTTCTAAAGGTGTCAACTCTGAAGTTCAAGCTTTGATGGGAATTAAGAGCTCTTTGATGGATCCTCATTCAGCTTTAAATAATTGGGATGCTGAGTCTGTGGATCCTTGCAACTGGGCTATGGTTACTTGTTCTCCTGATCATTTTGTCATTGCACTTGGAATTCCAAGCCAGAATATATCTGGTACTCTCTCATCAACCATAGGTTCCTTACCAAATCTTCAAACTGTGCTTTTGCAGGATAATAATATAACCGGACCAATTCCCTCTGAGATTGGAAGGCTTCAAAAGCTTCAAACACTTGATCTTTCTGACAATTTCTTCACTGGTCAACTTCCAGATTCTCTTTCACATATGAAGGGTCTCCATTATTTGAGGCTAAACAATAACACTCTTTCTGGACCAATTCCTTCTTCAGTGGCTAACATGTCTCACCTTGTTTTTCTGGATCTTTCTTATAATAACTTGAGTGGACCTGTACCTAGATTAAATGCTAAAACATTCAATATTGTGGGAAATCACCAGATATGTGTCACTGGAGTTGAACAAAACTGTTTTAGAACAACATTAATTTCTTCTGTTATGAATAATAACTCTCAAGATTTACAAGCTTCTAATAGACCAAAAAGTCACAAAGCTGCTTTGGCTTTTGCTTCAAGCCTAAGCTGCACCTTCTTACTTATTCTGGGATTTGGCTTTCTTCTCTGGTGGAGACAAAGATATAACAAACAAATATTCTTTGACACGAATGAACAATACCGCGAGGACATTTGCCTTGGAAACCTGAAGAAGTTCCATTTCAGAGAACTTCAGGTTGCTACAAATAACTTCAGCAGCAAGAACTTAGTTGGAAAAGGTGGTTTTGGGAATGTTTACAAAGGTTGTCTCCGAGATGGTACAGTTATAGCTGTAAAAAGGCTTAAAGATGGTAATGCAATTGGTGGTGAAATCCAGTTCCAAACTGAACTAGAAATGATCAGCTTAGCTGTTCATAGAAACCTTCTTCGCCTCTATGGATTTTGTATGACAACTACAGAAAGGCTCTTGGTTTATCCTTATATGTCAAATGGTAGTGTTGCTTCTCGTCTCAAAGGCAAGCCCTCTTTGGACTGGGGTACAAGGAAGAGGATAGCATTAGGAGCAGGAAGAGGGTTACTATACTTACATGAACAGTGTGATCCAAAGATTATTCACAGAGATGTTAAAGCAGCAAATATCTTGCTTGATGATTATTGTGAAGCTGTAGTAGGAGACTTTGGGTTGGCAAAGCTGTTGGACCACAGAGATTCACATGTGACAACAGCAGTGAGAGGAACTGTAGGACACATAGCCCCTGAGTACCTATCAACAGGACAATCCTCAGAGAAAACAGATGTATTTGGGTTTGGAATTCTTCTACTTGAACTGATTTCGGGACAGAGAGCTCTTGAATTTGGAAAAGCTGCAAACCAGAAAGGAGCTATGCTTGATTGGGTGAAGAAAATACATCAAGAGAAGAAGATTGATGTGTTAGTTGACAAGGATTTGAAAAACAACTATGACAGGATAGAGCTAGATGAAATAGTTCAAGTTGCTCTTCTATGTACTCAGTACCTTCCGAGCCACAGACCAAAAATGTCAGAAGTAGTTAGAATGCTTGAAGGAGATGGACTTGCAGAGAAATGGGAAGCTTCGCAGAGAGCTGAATCAACAAGAAGTAGAGGAAATGAACTCTCGTCTTCAGAGCGTTATTCTGATCTTACTGATGATTCTTCATTGCTTGCACAAGCAATGGAACTTTCTGGACCAAGATAA 1872 0.3916 MEGKKDAVLFCFLALFFMWTSVTGLLSSKGVNSEVQALMGIKSSLMDPHSALNNWDAESVDPCNWAMVTCSPDHFVIALGIPSQNISGTLSSTIGSLPNLQTVLLQDNNITGPIPSEIGRLQKLQTLDLSDNFFTGQLPDSLSHMKGLHYLRLNNNTLSGPIPSSVANMSHLVFLDLSYNNLSGPVPRLNAKTFNIVGNHQICVTGVEQNCFRTTLISSVMNNNSQDLQASNRPKSHKAALAFASSLSCTFLLILGFGFLLWWRQRYNKQIFFDTNEQYREDICLGNLKKFHFRELQVATNNFSSKNLVGKGGFGNVYKGCLRDGTVIAVKRLKDGNAIGGEIQFQTELEMISLAVHRNLLRLYGFCMTTTERLLVYPYMSNGSVASRLKGKPSLDWGTRKRIALGAGRGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAANQKGAMLDWVKKIHQEKKIDVLVDKDLKNNYDRIELDEIVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAEKWEASQRAESTRSRGNELSSSERYSDLTDDSSLLAQAMELSGPR* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2216 623 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 4 623 - -
Psa2g2216 623 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Psa2g2216 623 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Psa2g2216 623 MobiDBLite consensus disorder prediction 590 614 - -
Psa2g2216 623 ProSiteProfiles Protein kinase domain profile. 303 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g2216 623 SMART serkin_6 303 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g2216 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Psa2g2216 623 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Psa2g2216 623 Gene3D Ribonuclease Inhibitor 30 213 IPR032675 -
Psa2g2216 623 MobiDBLite consensus disorder prediction 580 623 - -
Psa2g2216 623 Gene3D Transferase(Phosphotransferase) domain 1 380 592 - -
Psa2g2216 623 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 4 623 - -
Psa2g2216 623 SUPERFAMILY L domain-like 32 224 - -
Psa2g2216 623 SUPERFAMILY Protein kinase-like (PK-like) 283 573 IPR011009 -
Psa2g2216 623 Gene3D Phosphorylase Kinase; domain 1 272 379 - -
Psa2g2216 623 Pfam Protein kinase domain 304 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2216 Psa-Chr2 242828763 242833149 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2216 9 623 Receptor kinase-like Gene Family AT5G16000 72.276 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Psa2g2216 Pkinase 1.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2216 - - gmx:100804283 1109.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2216 2 242828763 242833149 Psa2g2216 2 242828763 242833149 ECH