Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa2g2216 | ATGGAAGGAAAAAAAGATGCAGTTTTGTTTTGTTTTTTGGCTTTGTTCTTCATGTGGACTTCAGTAACTGGTTTGCTTTCTTCTAAAGGTGTCAACTCTGAAGTTCAAGCTTTGATGGGAATTAAGAGCTCTTTGATGGATCCTCATTCAGCTTTAAATAATTGGGATGCTGAGTCTGTGGATCCTTGCAACTGGGCTATGGTTACTTGTTCTCCTGATCATTTTGTCATTGCACTTGGAATTCCAAGCCAGAATATATCTGGTACTCTCTCATCAACCATAGGTTCCTTACCAAATCTTCAAACTGTGCTTTTGCAGGATAATAATATAACCGGACCAATTCCCTCTGAGATTGGAAGGCTTCAAAAGCTTCAAACACTTGATCTTTCTGACAATTTCTTCACTGGTCAACTTCCAGATTCTCTTTCACATATGAAGGGTCTCCATTATTTGAGGCTAAACAATAACACTCTTTCTGGACCAATTCCTTCTTCAGTGGCTAACATGTCTCACCTTGTTTTTCTGGATCTTTCTTATAATAACTTGAGTGGACCTGTACCTAGATTAAATGCTAAAACATTCAATATTGTGGGAAATCACCAGATATGTGTCACTGGAGTTGAACAAAACTGTTTTAGAACAACATTAATTTCTTCTGTTATGAATAATAACTCTCAAGATTTACAAGCTTCTAATAGACCAAAAAGTCACAAAGCTGCTTTGGCTTTTGCTTCAAGCCTAAGCTGCACCTTCTTACTTATTCTGGGATTTGGCTTTCTTCTCTGGTGGAGACAAAGATATAACAAACAAATATTCTTTGACACGAATGAACAATACCGCGAGGACATTTGCCTTGGAAACCTGAAGAAGTTCCATTTCAGAGAACTTCAGGTTGCTACAAATAACTTCAGCAGCAAGAACTTAGTTGGAAAAGGTGGTTTTGGGAATGTTTACAAAGGTTGTCTCCGAGATGGTACAGTTATAGCTGTAAAAAGGCTTAAAGATGGTAATGCAATTGGTGGTGAAATCCAGTTCCAAACTGAACTAGAAATGATCAGCTTAGCTGTTCATAGAAACCTTCTTCGCCTCTATGGATTTTGTATGACAACTACAGAAAGGCTCTTGGTTTATCCTTATATGTCAAATGGTAGTGTTGCTTCTCGTCTCAAAGGCAAGCCCTCTTTGGACTGGGGTACAAGGAAGAGGATAGCATTAGGAGCAGGAAGAGGGTTACTATACTTACATGAACAGTGTGATCCAAAGATTATTCACAGAGATGTTAAAGCAGCAAATATCTTGCTTGATGATTATTGTGAAGCTGTAGTAGGAGACTTTGGGTTGGCAAAGCTGTTGGACCACAGAGATTCACATGTGACAACAGCAGTGAGAGGAACTGTAGGACACATAGCCCCTGAGTACCTATCAACAGGACAATCCTCAGAGAAAACAGATGTATTTGGGTTTGGAATTCTTCTACTTGAACTGATTTCGGGACAGAGAGCTCTTGAATTTGGAAAAGCTGCAAACCAGAAAGGAGCTATGCTTGATTGGGTGAAGAAAATACATCAAGAGAAGAAGATTGATGTGTTAGTTGACAAGGATTTGAAAAACAACTATGACAGGATAGAGCTAGATGAAATAGTTCAAGTTGCTCTTCTATGTACTCAGTACCTTCCGAGCCACAGACCAAAAATGTCAGAAGTAGTTAGAATGCTTGAAGGAGATGGACTTGCAGAGAAATGGGAAGCTTCGCAGAGAGCTGAATCAACAAGAAGTAGAGGAAATGAACTCTCGTCTTCAGAGCGTTATTCTGATCTTACTGATGATTCTTCATTGCTTGCACAAGCAATGGAACTTTCTGGACCAAGATAA | 1872 | 0.3916 | MEGKKDAVLFCFLALFFMWTSVTGLLSSKGVNSEVQALMGIKSSLMDPHSALNNWDAESVDPCNWAMVTCSPDHFVIALGIPSQNISGTLSSTIGSLPNLQTVLLQDNNITGPIPSEIGRLQKLQTLDLSDNFFTGQLPDSLSHMKGLHYLRLNNNTLSGPIPSSVANMSHLVFLDLSYNNLSGPVPRLNAKTFNIVGNHQICVTGVEQNCFRTTLISSVMNNNSQDLQASNRPKSHKAALAFASSLSCTFLLILGFGFLLWWRQRYNKQIFFDTNEQYREDICLGNLKKFHFRELQVATNNFSSKNLVGKGGFGNVYKGCLRDGTVIAVKRLKDGNAIGGEIQFQTELEMISLAVHRNLLRLYGFCMTTTERLLVYPYMSNGSVASRLKGKPSLDWGTRKRIALGAGRGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAANQKGAMLDWVKKIHQEKKIDVLVDKDLKNNYDRIELDEIVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAEKWEASQRAESTRSRGNELSSSERYSDLTDDSSLLAQAMELSGPR* | 624 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa2g2216 | 623 | PANTHER | PROTEIN NSP-INTERACTING KINASE 2-LIKE | 4 | 623 | - | - | |
Psa2g2216 | 623 | Pfam | Leucine rich repeat N-terminal domain | 32 | 71 | IPR013210 | - | |
Psa2g2216 | 623 | ProSitePatterns | Protein kinases ATP-binding region signature. | 309 | 331 | IPR017441 | GO:0005524 | |
Psa2g2216 | 623 | MobiDBLite | consensus disorder prediction | 590 | 614 | - | - | |
Psa2g2216 | 623 | ProSiteProfiles | Protein kinase domain profile. | 303 | 558 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa2g2216 | 623 | SMART | serkin_6 | 303 | 558 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa2g2216 | 623 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 422 | 434 | IPR008271 | GO:0004672|GO:0006468 | |
Psa2g2216 | 623 | Pfam | Leucine rich repeat | 123 | 182 | IPR001611 | GO:0005515 | |
Psa2g2216 | 623 | Gene3D | Ribonuclease Inhibitor | 30 | 213 | IPR032675 | - | |
Psa2g2216 | 623 | MobiDBLite | consensus disorder prediction | 580 | 623 | - | - | |
Psa2g2216 | 623 | Gene3D | Transferase(Phosphotransferase) domain 1 | 380 | 592 | - | - | |
Psa2g2216 | 623 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 4 | 623 | - | - | |
Psa2g2216 | 623 | SUPERFAMILY | L domain-like | 32 | 224 | - | - | |
Psa2g2216 | 623 | SUPERFAMILY | Protein kinase-like (PK-like) | 283 | 573 | IPR011009 | - | |
Psa2g2216 | 623 | Gene3D | Phosphorylase Kinase; domain 1 | 272 | 379 | - | - | |
Psa2g2216 | 623 | Pfam | Protein kinase domain | 304 | 570 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa2g2216 | Psa-Chr2 | 242828763 | 242833149 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa2g2216 | 9 | 623 | Receptor kinase-like Gene Family | AT5G16000 | 72.276 | 0.0 | 919 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-II | Psa2g2216 | Pkinase | 1.8e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa2g2216 | - | - | gmx:100804283 | 1109.75 |