Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2201 ATGAAGATGATACGCCGACATATCCGACTCTTAGTTCTATCTAAAGTGATAAGGTGTATTATAGGGAGAAGTGGTTCAATCATAAATAAAATTTGGAAGAGAGCTAAGGCTGATATTCAAACCTCAAGAAGTAATAAGCCCAAATATGCAGATGACAATGACGAGCTTGTTGAGGTGGTAGGTAAAGTTGATTGTGTGAGAGATGCTCTAATTCAGTTAGTCTCGAGACTAAGGGAGGATGTATTAAGAAAACAGGACATTGACCAAAAATCTCCCATAGGTGCCGAATCCTTGTACCCAGGCAGTTCTGTTCTTTCAGCACCATCTATGTTGCCTTCTGTTCCTACTACCGCACTAGCTTATGGTCAGAGGACTGGAAGTGCAACTGGAACTGGACTGGGCATGCACTCTTCTAACAGCCGTTACGGATATGATTCTTACTCGATGCCAGCCAATGATCCTCATGCTAATGAGCCTAAGCGCATCACAAGGAACCAATTAGTTGCTATTGCTCAAGCAGCAGAGAAGAACAAGATGGAACAAGCTCCGAAACCTGCTGCACATGAAGTTATTGTCATCAGTTCTGATGAAGAAGCTGAAGTGAAAGAGAAAAGTCCACTTAAAGGGAGAAAGTTAAGAGACAGATCTAAGATAAATGTCAGGACATTTAACTCTTTCTTTCAGCTAGAAGCAAGGCTGCTGGTAGAAGTGTGCCAAATGATTTGTGAAGGTGATTGTCATGTACATGATTACATGGTTTCACAGCCGGATATAAATGCTAAGATGAGAGCGATTCTTATTGATTGGTTGATTGAAGTTCATCGAAAATTCGAACTCATGCCAGAAACTTTCTATCTGACTCTTAACATAGTTGACCGATTCTTGTCCATGAAGGTTGTTCCTAGAAAGGAACTTCAGCTTGTTGGCATAAGCTCAATGCTTATTGCATCTAAGTATGATCATGAAGTTCCTACTCCTTATGTTTTTCTGGTTCGGTACATCAAAGCCTCCACTCCTTCTGATAAACAGATGGAAAATATGGTGAATTTCTTAGCTGAACTTTCTATGAGGCATTATGTTACTGTATCATCGTATAGTCCTTCGATGATTGTTGCTTCTGCTGTTTATGCTGCAAGATGCACCACTCGATCCAGAAATATTGAGGCGGGAGGAGTGCACCTTGTGAAAGTATATTCAAGCTCCAGGCTTGAGAAGCTATTTGGCGATGTGGTTTATCACTTGTCTTCATTGAATTCATACAAAGAGTATGACACCTACAAAAAATGCTTGTTGCGTCTTTCATGCTGGAAGGGTCTCTATGAGTGCCTAAATGAAGTTTCTGTGGACACTTCGAGCCACATATCACATGCTGAGATATGCATGGAGGTTCTATTTACCTTATTACCAGTTGTGAAATCTGCTGGAAGTGTAATGTCAGGAGACACAAGTTCTGTAGAGGAATGGTTTGAGGCTGTAAGATGCTTAGGGAAGGCTCCACAGGGTTGGCTATTGGATTTCCTGAAGGTTTCGCAAGAGGAGTTTGTTCAGAGTTCATGCAAATCTTTTGAAGTCCAAAAGAAGGTTCATGCTAAAATCAAGATTGTTAAAACCGGTTCTCTTCCTCTAATTGAACTAGGAAAAATGAAATCTTACATATTGAGCTCCACATCACAAGGAGTCTGGGATGTTCTCTTGGAAGTTGCGGCTGTTTTGTATCATGCAGAGATAGGTTTTAAAAGACAGTGGCTTATTGATGCTCTTGAAATTAGTTGTGTGTCCAGTTTTCCTTCTACGGCACTGCAGTTTATTGGTCTGCTATCTGTTACCTGCTGCAAATACATGCCTTTTATAAATGTTGACCAACGAACAGTACTGAATGATCTACCAGTCACACTTGTGTCTCTTCTAGCAGATAAAAGTTGGAATGTTATGGCAGAAATTGTTGTTTCCCATCTCTTTTCATCGATAGAACGCATTGAGAATCATATGGCGGGGGATTTTCTACTGCAAGAGATGCATCACCCTCATTCACGGACACAAACTACTTCTGGTTATGAAGATATTTATACTCAACACACTATTCCCACTTTGATTATTTGGAGTTATGGTGGTAAACATGTTTCTGTGGAGAGATCTTGGGACAATTGGAAATCAAGAACTCCTTTGCAGAGATCGGACAAAGACTTTACAATATTGAAGGATTGTTCCTGA 2211 0.4043 MKMIRRHIRLLVLSKVIRCIIGRSGSIINKIWKRAKADIQTSRSNKPKYADDNDELVEVVGKVDCVRDALIQLVSRLREDVLRKQDIDQKSPIGAESLYPGSSVLSAPSMLPSVPTTALAYGQRTGSATGTGLGMHSSNSRYGYDSYSMPANDPHANEPKRITRNQLVAIAQAAEKNKMEQAPKPAAHEVIVISSDEEAEVKEKSPLKGRKLRDRSKINVRTFNSFFQLEARLLVEVCQMICEGDCHVHDYMVSQPDINAKMRAILIDWLIEVHRKFELMPETFYLTLNIVDRFLSMKVVPRKELQLVGISSMLIASKYDHEVPTPYVFLVRYIKASTPSDKQMENMVNFLAELSMRHYVTVSSYSPSMIVASAVYAARCTTRSRNIEAGGVHLVKVYSSSRLEKLFGDVVYHLSSLNSYKEYDTYKKCLLRLSCWKGLYECLNEVSVDTSSHISHAEICMEVLFTLLPVVKSAGSVMSGDTSSVEEWFEAVRCLGKAPQGWLLDFLKVSQEEFVQSSCKSFEVQKKVHAKIKIVKTGSLPLIELGKMKSYILSSTSQGVWDVLLEVAAVLYHAEIGFKRQWLIDALEISCVSSFPSTALQFIGLLSVTCCKYMPFINVDQRTVLNDLPVTLVSLLADKSWNVMAEIVVSHLFSSIERIENHMAGDFLLQEMHHPHSRTQTTSGYEDIYTQHTIPTLIIWSYGGKHVSVERSWDNWKSRTPLQRSDKDFTILKDCS* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2201 736 Gene3D - 248 321 - -
Psa2g2201 736 Gene3D Immunoglobulins 687 735 IPR013783 -
Psa2g2201 736 Pfam KH domain 8 72 IPR004088 GO:0003723
Psa2g2201 736 SUPERFAMILY Cyclin-like 325 390 IPR036915 -
Psa2g2201 736 Gene3D - 323 419 - -
Psa2g2201 736 PANTHER FOCADHESIN FAMILY MEMBER 392 675 IPR045163 GO:0060147
Psa2g2201 736 CDD CYCLIN 262 348 IPR013763 -
Psa2g2201 736 ProSiteProfiles Type-1 KH domain profile. 5 73 - -
Psa2g2201 736 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 6 86 IPR036612 GO:0003723
Psa2g2201 736 ProSitePatterns Cyclins signature. 263 294 IPR006671 -
Psa2g2201 736 Pfam Cyclin, N-terminal domain 247 347 IPR006671 -
Psa2g2201 736 Gene3D K Homology domain, type 1 6 81 IPR036612 GO:0003723
Psa2g2201 736 Pfam Glycogen recognition site of AMP-activated protein kinase 694 732 IPR032640 -
Psa2g2201 736 SUPERFAMILY Cyclin-like 248 343 IPR036915 -
Psa2g2201 736 SMART cyclin_7 268 353 IPR013763 -
Psa2g2201 736 SMART Cyclin_C_2 324 457 IPR004367 -
Psa2g2201 736 CDD PCBP_like_KH 7 74 - -
Psa2g2201 736 CDD CYCLIN 323 381 IPR013763 -
Psa2g2201 736 SMART kh_6 4 78 IPR004087 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2201 Psa-Chr2 239993804 239997945 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2201 178 379 Core Cell Cycle Gene Families AT2G26760 41.538 1.16e-48 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2201 - - gmx:100775274 417.157