Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2199 ATGAGGCAAACTAGTGGTGCTCGTATTAAGGTTGATGATTCCAAGGCTCGTCTTGATGATTGCTTAATCACTATAACTGCAACAGAATCTTCAAGGAGAAGTGGTTCAATCATAAATAAAATTCGGAAGAGAGCTAAGGATGATATTCAAACCTCAAGAAGTAATAAGCCCAAATATGCAGATGACAATGACGAGCTTGTTGAGATGGTAGGTAAAGTTGATTGTGTGAGAGATGCTCTAATTCAGTTAGTCTCGATACTAAGGGAGGATGTATTGAGAAAACAGGACATTGACCAAAAACCTCTCATAGGTTCCGAATCCTTGTATGCAGGAAGTTCTGTTCTTTCAGCACCATCTATGTTACCTTCTGTTCCTGCTACTGCACTAGCTTATGATCCTCATGCTAATGAGCCTAAGCGCATCACAAGAAACCAATTAGCTGCTATTGCTCAAGCAGCAGAGAAGAACAAGATGGAACAAGCTCCGAAACCTGCTGAACATGAAGTTATTGTCATCAGTTCTGATGAAGAAGCTGAAGTGAAAGACAAAAGGCCACTTAAAGGGAGAAAGTTAAGAGACAGATCTAAGATAAATGTCAGGACATTTAGCTCTGTGCTTTCAGCTAGAAGCAAGGCTACTGGTAGAAGTGTGCCAAATGATTTGGTAATGAGCATTGATGCAACTGACAAAGACAATGAATTGGCTGCAACTGAGTATATTGATGATATTTACAAGTTTTACAAACTCAGTGAAGGTGATTGTCCTGTACATGATTACATGGTTTCACAGCCGTATATAAATGCTAAGATGAGAGAGATTCTTATTGATTGGTTGATTGAAGTTCATCGAAAATTTAAACTCATGCCAGAAACTTTCTATCTGACTCTTAACATAGTTGACCGATTCTTGTCCATGAAGGTTGTTCCTAGAAAGGAACTTCAGCTTGTTGGCATAAGCTCAATGCTTATTGCATCTAAGTATGAAGAGATATGGGCACCAGAGGTTACAGATTTTGTATGCATATCAGACAATGCCTATGTTAGAGAACAGGTTTTGGTTATGGAGAAAACAATCCTGGGAAACCTGGAATGGTATTTAACAGTTCCTACTCCTTATGTCTTTCTGGTTCGATACATCAAAGCCTCCACTCCTTCTGATAAACAGATGGGAAATATGGTGAATTTCCTAGATGAACTTTCTATGATGCATTATGTTACCGTATCATCGTATAGTCCTTCGATGATTGGTGCTTCTGCTGTTTATGCGGCAAGATGCACCACTCGATCCAGAAATATTGAGGCGGGAGGAGTGCGTGCTGTTTGCAATAGCTCATGCAAACCAATTTGA 1347 0.3957 MRQTSGARIKVDDSKARLDDCLITITATESSRRSGSIINKIRKRAKDDIQTSRSNKPKYADDNDELVEMVGKVDCVRDALIQLVSILREDVLRKQDIDQKPLIGSESLYAGSSVLSAPSMLPSVPATALAYDPHANEPKRITRNQLAAIAQAAEKNKMEQAPKPAEHEVIVISSDEEAEVKDKRPLKGRKLRDRSKINVRTFSSVLSARSKATGRSVPNDLVMSIDATDKDNELAATEYIDDIYKFYKLSEGDCPVHDYMVSQPYINAKMREILIDWLIEVHRKFKLMPETFYLTLNIVDRFLSMKVVPRKELQLVGISSMLIASKYEEIWAPEVTDFVCISDNAYVREQVLVMEKTILGNLEWYLTVPTPYVFLVRYIKASTPSDKQMGNMVNFLDELSMMHYVTVSSYSPSMIGASAVYAARCTTRSRNIEAGGVRAVCNSSCKPI* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2199 448 CDD CYCLIN 270 359 IPR013763 -
Psa2g2199 448 ProSitePatterns Cyclins signature. 271 302 IPR006671 -
Psa2g2199 448 PANTHER CYCLINS 130 428 IPR039361 -
Psa2g2199 448 CDD CYCLIN 367 426 IPR013763 -
Psa2g2199 448 SUPERFAMILY Cyclin-like 231 366 IPR036915 -
Psa2g2199 448 SMART cyclin_7 276 360 IPR013763 -
Psa2g2199 448 SMART cyclin_7 373 446 IPR013763 -
Psa2g2199 448 Pfam Cyclin, C-terminal domain 369 429 IPR004367 -
Psa2g2199 448 Gene3D - 256 360 - -
Psa2g2199 448 Gene3D - 361 443 - -
Psa2g2199 448 Pfam Cyclin, N-terminal domain 242 366 IPR006671 -
Psa2g2199 448 PANTHER CYCLIN-B1-4 130 428 - -
Psa2g2199 448 SUPERFAMILY Cyclin-like 370 429 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2199 Psa-Chr2 239972127 239973858 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2199 141 424 Core Cell Cycle Gene Families AT2G26760 56.690 5.18e-104 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2199 K21777 - gmx:547782 381.719