Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2191 ATGTTTACCCGAAGCCGACGCTTCCCTTCATCTTCTTCATCCTCCAAGAATTCAGATGATTCAATTTCAAAAAAAAAGGTCATCAATGCCATCAAGACTCAGTTAACGAAGAAACGTCCCGCTCTCGCTGAAGTGACCAATAGCACAAATGCTTCTCTCGTCGAAACCTCCGTTGGTGCTCCATCGAAACCTATGGTGCCGTGTGTATCCAAAACTGCAAAGACAAAGACGGATTCTATTGCGAGTTCAAAGAAAAATGTTATGTCTAAGAACACTTTGCAGCCCCCATTAAGAGTCAAATTAGGTGAATTGGTGCCTGCTAAAGAGGCATGTTTGATCAAGAATAGTCAAACTAAGTCTGAAGTTCAAGCCTTCATTGTACCAAGCAATGATGACTCTTCCAAAATGGCAGGGAGAATACAAGATATTGACACCATACTAAAGTCAAGAGCAAATGAAATTGTTGACATTGACTACAATTTCAAAGACCCACGATTTTGTGCATCCATTGCCAATGAAATCTACGAAAATTTGTGTGTATCTGAGAAAATTAAAAGGCCATCTATAGACTTCATGGAAAAGATACAGACAAACATCAATGCTGGCATGCGGGCAATGCTTATTGAATGGCTTGTGGAGGTTGCTGAAGAGTACAAACTTCTATCTGATACACTACTTTTGGCAGTTAACTACCTTGATCGCTATCTCTCAAGCAAAAGAATAAACACTAATCCAATGTCGAACCCAGAAGCTGGCGGAATTGAAATTGCATTAGCAAGGGCATTAAACAACGGACTCAGATATGCTGCGAAGCTCATTGCTTCTTCTGAGTCCTCAATCTCCAAATCACTGAGTAGAAATTTCCGTTCAATTGGTGTGAAGAAGATGGGAGATGGACATGGCCACATCAAACCAGGCCACATGCATTCATCTCATGCACAAATTAGACTAGGTGAAGCATCATGGCTCGAAAATGTCTCTTGCAGTGTTCACTGCTTTTTTTCGGTATTGGTGTGGGAGTTCCTATCTTTGCAGTCGTTTTCCAGCAAAAGAAGACATCAGTTGGTCGACTCATCTGATACTTCATTAGCATTAATAATTTGGTGGATTTGGGAATCCTAG 1122 0.4091 MFTRSRRFPSSSSSSKNSDDSISKKKVINAIKTQLTKKRPALAEVTNSTNASLVETSVGAPSKPMVPCVSKTAKTKTDSIASSKKNVMSKNTLQPPLRVKLGELVPAKEACLIKNSQTKSEVQAFIVPSNDDSSKMAGRIQDIDTILKSRANEIVDIDYNFKDPRFCASIANEIYENLCVSEKIKRPSIDFMEKIQTNINAGMRAMLIEWLVEVAEEYKLLSDTLLLAVNYLDRYLSSKRINTNPMSNPEAGGIEIALARALNNGLRYAAKLIASSESSISKSLSRNFRSIGVKKMGDGHGHIKPGHMHSSHAQIRLGEASWLENVSCSVHCFFSVLVWEFLSLQSFSSKRRHQLVDSSDTSLALIIWWIWES* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2191 373 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 146 244 - -
Psa2g2191 373 SUPERFAMILY Cyclin-like 162 244 IPR036915 -
Psa2g2191 373 ProSitePatterns Cyclins signature. 204 235 IPR006671 -
Psa2g2191 373 Gene3D - 176 187 - -
Psa2g2191 373 Gene3D - 188 244 - -
Psa2g2191 373 Pfam Cyclin, N-terminal domain 173 244 IPR006671 -
Psa2g2191 373 PANTHER CYCLINS 146 244 IPR039361 -
Psa2g2191 373 MobiDBLite consensus disorder prediction 1 23 - -
Psa2g2191 373 CDD CYCLIN 203 247 IPR013763 -
Psa2g2191 373 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2191 Psa-Chr2 237782254 237783871 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2191 153 242 Core Cell Cycle Gene Families AT1G77390 61.111 8.68e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2191 K06627 - vvi:100250590 150.214