Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2171 ATGCAACCTCACTCATTCTCCTACACATGTGACACTGTTGACGAGTCCTCCATTTCACTCTCACTTGGCCCTCCTGGTACTCACCACAAACCCAAACTATTCTCCACAACAAATCAATCACCTTCTACTACTCTTCATCATAATCATCACCAAAACCAAAACCTTACCATTAATGATGACCAGAGTGGTGTAACAGTTGCACTTCACATTGGTCTTCCAACCACCATATCACAAAACAACACAACTATTACCAAACCAGATCATCATCATCATCATCATTTGCCTTCACCTCTGATTCAAGGTCAATATTGGATCCCTTCTCCTGCTCAAATCCTCATTGGACCAACACAGTTCTCTTGCACAGTCTGCAATAAAATGTTCAACCGTTTCAACAACATGCAGGTTAGTCAACAAACTGTCCAGTAG 426 0.4178 MQPHSFSYTCDTVDESSISLSLGPPGTHHKPKLFSTTNQSPSTTLHHNHHQNQNLTINDDQSGVTVALHIGLPTTISQNNTTITKPDHHHHHHLPSPLIQGQYWIPSPAQILIGPTQFSCTVCNKMFNRFNNMQVSQQTVQ* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2171 141 PANTHER ZINC FINGER PROTEIN WIP2 11 135 IPR043584 GO:0003700|GO:0010468
Psa2g2171 141 PANTHER ZINC FINGER PROTEIN WIP6 11 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2171 Psa-Chr2 234535117 234535849 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2171 14 135 C2H2 Transcription Factor Family AT1G13290 49.206 1.48e-25 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2171 - - aprc:113870355 155.992