Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2170 ATGTGGGGACATGGGTCTCAATATAGGAAAGGACCAGAATCTCTAAGGGGAGTAAAACCAGCTTCATCCATGTTAAGGCTTCCATGCTATTGCTGTGCCGAGGGATGCAAAAACAACATAGAGCATCCAAGGTCAAGACCACTGAAGGATTTCAGGACACTTCAGACACACTACAAGAGGAAACATGGAGCTAAGCCATTTGGATGTAGAAAGTGTGGGAAACCCTTTGCAGTGAGAGGAGACTGGAGAACACACGAGAAAAACTGTGGAAAACTTTGGTTCTGCATCTGTGGATCTGATTTCAAACACAAGAGATCACTCAAAGATCATGTTCGCGCTTTTGGGGATGGTCACGCTCCACACACTGTCGAGAGTTGTGAAGATCAGGAAGTTTTGTTAGGGGATGAATACGATGACGAATTTGAAGGAGATGAAAATGATGAAGATGATGATGATATTGATAACATGGATGGAATGATTTTTAGTTTTAATTAA 495 0.4222 MWGHGSQYRKGPESLRGVKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVESCEDQEVLLGDEYDDEFEGDENDEDDDDIDNMDGMIFSFN* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2170 164 PANTHER ZINC FINGER PROTEIN WIP6 1 152 - -
Psa2g2170 164 PANTHER ZINC FINGER PROTEIN WIP2 1 152 IPR043584 GO:0003700|GO:0010468
Psa2g2170 164 SUPERFAMILY beta-beta-alpha zinc fingers 52 87 IPR036236 -
Psa2g2170 164 Gene3D Classic Zinc Finger 26 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2170 Psa-Chr2 234534154 234535064 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2170 1 134 C2H2 Transcription Factor Family AT1G13290 85.185 3.86e-81 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Psa2g2170 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2170 - - gmx:100808573 289.271