Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2166 ATGATTAGAGTTTGGCTTGTGTTGATGCCTCTCTCCAATTTGTTGTTCTCTTCTACTGCGGTTAGCTTGGAGAATTCGACAGTACCGGAGTTTATAACTATTGGGGTTCTCTACTCTTTCAATACTAGTGTTGGTAGAATAGTGAAAATTGCAGTGGAAACTGCGGTTGATGATATAAATTCTGATTCTACTATTCTTGGTAAAACTAAGTTGAAGCTCTCATTTCAAGAAGATTCAAAATACAGAGGCTTTTTGAGCATTGCTGAAACGTTGCAGCTCATGGCGACACACACTGTGGCCATTATCGGTCCGCAGACATCTACGACCGCTCATGTCATATCTCATATAGCAAATGAGCTTCATGTTCCTCTGTTATCGTTTTCAGCCACTGATCCTACTCTTTCCTTGCTTCAATTCCCGTTCTTCATTAGAACTGCTTTCAATGACATTTTTCAAATGACTGCAATAGCAGACATAGTTAGCCACTACGGTTGGAGAGAGGTTATCGTGGTCTACGGGGATGACGACCATGGGAGGAACGGAATTGGTGCGTTAGCGGATAAGCTTGCTGAGAGACGTTGCAAGATATCGTTTAAACGTGGCTACTGA 609 0.422 MIRVWLVLMPLSNLLFSSTAVSLENSTVPEFITIGVLYSFNTSVGRIVKIAVETAVDDINSDSTILGKTKLKLSFQEDSKYRGFLSIAETLQLMATHTVAIIGPQTSTTAHVISHIANELHVPLLSFSATDPTLSLLQFPFFIRTAFNDIFQMTAIADIVSHYGWREVIVVYGDDDHGRNGIGALADKLAERRCKISFKRGY* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2166 202 Gene3D - 148 199 - -
Psa2g2166 202 PANTHER GLUTAMATE RECEPTOR 11 200 - -
Psa2g2166 202 SUPERFAMILY Periplasmic binding protein-like I 30 202 IPR028082 -
Psa2g2166 202 Gene3D - 50 147 - -
Psa2g2166 202 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 11 200 - -
Psa2g2166 202 PRINTS Metabotropic glutamate GPCR signature 101 127 IPR000337 GO:0004930|GO:0007186|GO:0016021
Psa2g2166 202 PRINTS Metabotropic glutamate GPCR signature 133 152 IPR000337 GO:0004930|GO:0007186|GO:0016021
Psa2g2166 202 PRINTS Metabotropic glutamate GPCR signature 152 168 IPR000337 GO:0004930|GO:0007186|GO:0016021
Psa2g2166 202 PRINTS Metabotropic glutamate GPCR signature 168 185 IPR000337 GO:0004930|GO:0007186|GO:0016021
Psa2g2166 202 Pfam Receptor family ligand binding region 49 200 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2166 Psa-Chr2 233975498 233976572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2166 5 199 Ion Channels AT3G51480 54.000 1.10e-72 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2166 K05387 - gmx:100812261 306.99