Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2164 ATGTTTGGTTCAGTTGTTCCTGGTATTAATAGTGGACTAAATATGGAGAACTTGCAGCAAATGAATTCTGAGCAAAGAGATGTACCAATGGAAGATTTTCATGCGAGGAATTCTGGTTTCAATATGCTAGATGGTTCAGATAGTTTTAGTGGATTTCCATCTCTTCAAAGTGGGAGCCGGAGTGCACTTATGCAGTCTGCTGTGGCTGAAACTTCTAGTAGTGAAGTTGGGCCTTTACCCAGTGATAGCAGCAAACAACAATCAGTTTGGCCTGATGATAATTTGCAGTCAGTCCCCCATATAAACTCAAAGCCTATAACTCGTCAAGATGAACTTAGCAGGCCTAATTCCACTATCAATTCCCCAGATTACATAATGTTGTCTCGCCAATTCAAAGCAACGGCAACGAAGCTTATTTCTGTTCTGGAGCTGAAACAAAAAACCGGTGGAAGAACCAAAGTCCTTTTGGACAACGTTCCTATTCACAAGTTAGCTGATATATTGGTTGCAAGTTTTGAGATGAGTTTTGAAGAACAACTATCTATGCTGGATTCAGTTGGCCCTAAATTAAGGCTTTCAAAAGCAATTGAGTTAGTTGATAGGCATTTACAGTCAATACATAAAGGACCTTCACCCGTTGATTGTCGGCATCTAAACAGACCTCAAACCTGCATCACAAGAACAATTGCTATGACAGAAAAAGATTTGGAGGCACCTGTTTGGGATTGTGTTATTGGTATCCCGTCATACTTCACCGACTTGCAGAGACGAGCTTATCTTGATACGGCAAAAATTGTTGGGTTAAAGCCTTTGAGATTGATCCATGATTGTACTGCAACTGCCCTTAGTTATGGAATTTACAAAATGAATTTTCAAAGCGAGGGTTCAACATATGTTGCATTTATCGACATTGGTCAATGCGATACTCAGCCAAGCATACTTGAAGCAGGCTTGAATGCAGAGAAGATTGTTTCTGTAGAACTAGTTGGTTCAGGTTCTAGGATTCCAGCTTGTGCTATGCTCAGTCCCGTATACCGTGTGAGAGACTATGAGGTCCAGGATATCAGTTCTTTTTCATATGGACTTTCATCTGATGAAGGTCCAATTTCTGTAGGATTAAATGGTGTAATTTTCCCAAAAGGCCAATTGATTCCAAGTACTGCAGTTCTACAACTCCAGCGGACTAGTTTTTTCCATTTGGAAGCTTTCTATCCGAATCATAATGAACTACCACCTGGAATAAGTCCCAAAATTAGTTCCTTCATGATTGTTCCTTTGCCTGAATCTCATGGCAGTAAGACAAGAGTTAAAGTTCGAGTTCAACTAAATCTGCACGGAATTTTCAGTATTGAATCGGCCACATTGATCACAGATCACGCGAATGATGATCACTCAAATTATGATGCAATGGATGTTGATCCCGAGTCTGAAACATCAGATAGTACCAATTTTGTTGCCAATGGCGCTGAAGATAGTAACAATCAGTCCGATTCTCCACAAAGTTCTGCTGATTGTTCAAAAAAAGATAAAGCTAACAGAAAGCTTCTTATTCCGGTGAATGAGAGTATCTATGGTGGAATGACAATGGCAGAGATTTGTGAAGCCCATGAAAAAGAACTCCAGTTAGCCCAACAGGATAGAGCAATGGCATACTCTCTTTTGCACATTCGAGAATGA 1677 0.4019 MFGSVVPGINSGLNMENLQQMNSEQRDVPMEDFHARNSGFNMLDGSDSFSGFPSLQSGSRSALMQSAVAETSSSEVGPLPSDSSKQQSVWPDDNLQSVPHINSKPITRQDELSRPNSTINSPDYIMLSRQFKATATKLISVLELKQKTGGRTKVLLDNVPIHKLADILVASFEMSFEEQLSMLDSVGPKLRLSKAIELVDRHLQSIHKGPSPVDCRHLNRPQTCITRTIAMTEKDLEAPVWDCVIGIPSYFTDLQRRAYLDTAKIVGLKPLRLIHDCTATALSYGIYKMNFQSEGSTYVAFIDIGQCDTQPSILEAGLNAEKIVSVELVGSGSRIPACAMLSPVYRVRDYEVQDISSFSYGLSSDEGPISVGLNGVIFPKGQLIPSTAVLQLQRTSFFHLEAFYPNHNELPPGISPKISSFMIVPLPESHGSKTRVKVRVQLNLHGIFSIESATLITDHANDDHSNYDAMDVDPESETSDSTNFVANGAEDSNNQSDSPQSSADCSKKDKANRKLLIPVNESIYGGMTMAEICEAHEKELQLAQQDRAMAYSLLHIRE* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2164 558 Pfam Hsp70 protein 230 315 IPR013126 GO:0005524|GO:0140662
Psa2g2164 558 Pfam Hsp70 protein 337 470 IPR013126 GO:0005524|GO:0140662
Psa2g2164 558 MobiDBLite consensus disorder prediction 489 509 - -
Psa2g2164 558 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 348 520 IPR029047 -
Psa2g2164 558 SUPERFAMILY Actin-like ATPase domain 226 287 IPR043129 -
Psa2g2164 558 Gene3D - 228 288 - -
Psa2g2164 558 PANTHER HSC70CB, ISOFORM G-RELATED 230 313 - -
Psa2g2164 558 PANTHER HSC70CB, ISOFORM G-RELATED 338 550 - -
Psa2g2164 558 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 345 549 IPR029047 -
Psa2g2164 558 PANTHER HEAT SHOCK 70 KDA PROTEIN 338 550 - -
Psa2g2164 558 PANTHER HEAT SHOCK 70 KDA PROTEIN 230 313 - -
Psa2g2164 558 MobiDBLite consensus disorder prediction 63 117 - -
Psa2g2164 558 Gene3D - 289 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2164 Psa-Chr2 233665772 233668417 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2164 231 314 Calmodulin-binding Proteins AT3G12580 36.905 3.02e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2164 K09489 - gmx:100783952 260.381