Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2138 ATGGAGCTTGACATTGCAGTTGATTTTATCGCACCCCAGTCACCTGGTAGATACATATCATACTGGAGGATGGCATCTCTCTCCGGACATAAATTTGGCCAACGGGTTTGGGTCCTTATACAGATTATAGATATCAATGTTCAACCTGTTGAGGATGTTGCTTTTCACCAACCCAAAAATCCTTCTGTAATACCTGCACAGAATTTGTCAGCACCAACAAGTGTTATATCTGTAACACAAGCATGCAAAGAGAGTCAGAACAATGATTTCATTACTTCTCCAGGTCTGCTGCATGGGCAGCAGTATAAATACGTGAATTCACCTGATCTTTGTCTTTCTTCATCTAATGTTCAGAAGCATGTTGAGGAACCCTCTAGAATATCTGTTAAACTAAATTCAGGGAATGCAACTCCCATTGTTAGTTTGCCAAGTCTGACAGATTCAGTGGACAGTGTTGCTGTCAAACAAGAATTTATCCAACAGTCAGATAGAGAGAGAAGATCTAGCTTGCACAGTCAGGTTGTAAAGGCATTGAGTGGCTTGGCAACTGTCGATGAAGCTTCAGGGTCTAATATCCCTGTGCTTTCTGGGTTTAGTATTCCTAAATTGGTCTTGCAGATAGTTACAGTCGATGCCATTTTCAGAGTCACAAGTCCATCAATAGTTACAGTCGATGCCATTTTCAGAGTCACAAGTCCATCAGTGAGTGAGCTTGTTATTTTAAAAGAGACTGTCTTTACTGTGTACAGCAAGGCTCGTCGTGTTTCATTTTCTCCACACACCGCAAAACCAGTCTCAACAAAGGTTTGTTCAAAATCTGTTAAAATGCTGGTACAATTTGAAACACCGGCGGGTTTCGCTCTTTTCAAAGTTCTCAATGAAGGAAAGCTTTCTGAAGTTCGGGATTTATCTCTGGATTTTTCCACTGCTGATGCTGCAAGAAAGGTGGTCAAGCTGAAAGCGTTTTCTAAGTTTGAGAATAACAGCAGTGGGCTCATTGATGATTCACATGATATTAAGACCAGCAATAACACCAACATCCTTGGTAGCTTGACACTGAGAATCATTAAAGTAAGCAAAGGAACACAAGAGGTACAGACCCAAGACATGGCGAAACTTGTCGGTATCCGGCTGAAGCTAATGTTCAAACTTTGCAATTTAATGAAGCAGAGAAACTCTGTCAAATGGCTCTTGACATTCATAGAGCAAATAGTTCAGCATCATCAATCAAGTGCAGCAGTAGATAAGTGCTTCCTCATCTCTTCATTATTCACTCTACCGCCACCGCCGTTTAAACTTCCAGTTCATTGGCATAAGCCCGGTAGTGATGGTTCCATGCCAAGACACAGTGGAACTACTGATGTTCATGATAAAAATTTAACCCAACTCTCTTCATCCACTTCTAAGACTTCAGTTGATGATCAAGAGAAGGAACGACTTCATCAGCAGCAGCAGGCTGAACGACTTCATCATCAGCAGCAGGTTGAGCGGCTTCATTATCATCAGCAACAGAAGGAACGATTTCAACAACAGCAAGATATTCACCATCAACAACTAGTTCACCAACAATTGAAACTTCAGCCCCAACAACAGTCTCAAGCTCAGTTAATGCATCAAGATGTTCTTGAACAGTTAATGCATGGACAATCAAAACTTGATCCTTCTAGAGATAACTTGTTAGATCATCCAACAATTGAAACTTCAGCCCCAACAACAGTCTCAAGCTCAGGCACCTTGATCCGTCGACAGAGCAGTTTATCTAAGCAAAATGGCTCTCAGGTCATGAAAAAACTCAGCACCGCTGCGGAACACCCTCGAGCTTTACATCCATCGCTCTCCTCCGCCGTTAAAGAACTCGTCGAAAATAGCTTAGACGCCGGCGCCACCAGCATCGAAATCTCTCTCAAAGACTTCGGTGAAGAATGGTTTCAGGTCATCGATAACGGTTGCGGCATTTCCCCAAACAATTGCAAGGTTCTTGCACTGAAGCATCATACTTCAAAATTATCGGAATTTCATGATCTTCAGTCTCTTACTACTTTTGGCTTTAGAGGAGAGGCATTGAGTTCTCTTTGTGCTCTTGGAAACTTGACAGTTGAAACGAGAACCGCGAGCGAAGAGGTTGCTACACTTTTGACATTTAACCATTCTGGTGCTCTGGCGGCTGAAATGAAAACTGCGCAACAAGTTGGAACGACTGTCACAGTTAAAAAGCTGTTCTATAATCTTCTGGTGCGAAGCAAAGAGTTTAAGCGGAACATTCGCAAGGAATATGGCAAGTTGGTTTCTCTCTTGAATGCATATGCCCTTATTGCAAAAGGTGTTCGATTTGGCTGTACCAACACTACTGGCAAAAATGCAAAGTCTGTGGTACTTAAGACACAAGGAAATGATTCTCTAAAAGATAACATCATAACAGTGCTTGGCATGAACACTTTCAACTGCTTGGAACCCATGTCATTATGTATATCTGAGAGTTGCGAAGTTGATGGTTTTCTCTCCAAGCCTGGACTCGTACCAGCTATTATTGATCATATTCGAGATGGAGTTGTAAAAAAGGTGGAGGAAAAAGGGGGACTTGCTAAGAATCTTTTCCAGACTGCATACAATCGTCGACTGGCTGCTGTCAAAGGAATGTCCATCAGCTCAAAGTTCAACAAGTTAACAGTTTTGAGATTGTACTCATACTTCACTGTTGAGGAGAAGGCCTCAAGCGCTTGCGTCTCTCGAATCTTGAAGCAACCTCCTGGAAAGTTCATTAGTCATGCAGTTGATGATGTCATCAAAAATTTTACCATTGCAGTCACAATTGTAGTTGTTGCAGTGCCTGAAGGTCTACCTTTGGCTGTTACTTTAACCTTGGCATATTCAATGCGGAAAATGATGAAAGATAAAGCCTTGGTACGAAGACTGTCAGCCTGCGAAACTATGGGCTCTGCTACTACAATCTGTAGTGATAAGACAGGAACATTAACCTTAAATCAGATGACTGTTGATGAGGCATATGTTGGGAGGAACAATCTAAATCCATCAGATGACTCTTCAAAGTTTCATCCAGAAGCATTATCCCTGATAAATGAAAGCATTGCACAGAATTCCGCTGGAAATGTTTTTGTGTCTAAGGATGGTGGAGCGGTAGAGGTTTCAGGATCACCAACAGAGAAGGCGATTCTTTCATGGGCAGTCAAGTTGGGTATGAATTTTGATCTTATCAGATCTAGTTCGACAGTTTCTTCACGTCAATCCCGAGAAAAAACGAGGCGGTGTTGCTCTGAAGCTGGCGGACTCTGGAGTGCATATACACTGGAAAGGAGCTGCAGAAATAATTCTAGGAGCATGATCCTCAGATCATATGAATTAGACCAAATTCCATCTAATGAGGAGGATTTAAACCAATGGTCCTTACCAGAAGATGAGCTTGTTTTGCTTGCTATTGTTGGAATCAAGGATCCTTGTCGCCCTAGTGTCAAAGATGCTATGAGAATATGTACTGAAGCTGGTGTTAAGGTACGTATGGTTACCGGAGATAACCTTCAAACCGCAAAGGCAATAACTATGGAGTGTGGGATACTAGCTTCAAATGAAGATGTTGTTGAGCCAAATATAATTGAAGGAAAGGTATTTAGGGAGCTATCGGAACAAGAAAGGGAACAGTTGAGCAGAATCAAATCCAAAACTTCACGACTGCCGGCACCAATGGCAAGTGTTATCACACGACTGTCATTGCAGCAAAACAATCGTAAACCTGCAAAAATCAAAACCAAGAACAACCACCTATTTCAGTTGGTGACAGAGACGTTTTTCCAGAATTGTCGTTGTCATAAATTCGGAGAGCAAGTTGTTGCCTCAAGAATACTTGTGAGGAATCCGGCGTTTGATGTTACACCTGCTAATCTAATTTTTGGGATCATCGCTGAGAAGGGTGTCATTACAAAGACTAACGCTAATGATTGTTTTTGA 3960 0.4189 MELDIAVDFIAPQSPGRYISYWRMASLSGHKFGQRVWVLIQIIDINVQPVEDVAFHQPKNPSVIPAQNLSAPTSVISVTQACKESQNNDFITSPGLLHGQQYKYVNSPDLCLSSSNVQKHVEEPSRISVKLNSGNATPIVSLPSLTDSVDSVAVKQEFIQQSDRERRSSLHSQVVKALSGLATVDEASGSNIPVLSGFSIPKLVLQIVTVDAIFRVTSPSIVTVDAIFRVTSPSVSELVILKETVFTVYSKARRVSFSPHTAKPVSTKVCSKSVKMLVQFETPAGFALFKVLNEGKLSEVRDLSLDFSTADAARKVVKLKAFSKFENNSSGLIDDSHDIKTSNNTNILGSLTLRIIKVSKGTQEVQTQDMAKLVGIRLKLMFKLCNLMKQRNSVKWLLTFIEQIVQHHQSSAAVDKCFLISSLFTLPPPPFKLPVHWHKPGSDGSMPRHSGTTDVHDKNLTQLSSSTSKTSVDDQEKERLHQQQQAERLHHQQQVERLHYHQQQKERFQQQQDIHHQQLVHQQLKLQPQQQSQAQLMHQDVLEQLMHGQSKLDPSRDNLLDHPTIETSAPTTVSSSGTLIRRQSSLSKQNGSQVMKKLSTAAEHPRALHPSLSSAVKELVENSLDAGATSIEISLKDFGEEWFQVIDNGCGISPNNCKVLALKHHTSKLSEFHDLQSLTTFGFRGEALSSLCALGNLTVETRTASEEVATLLTFNHSGALAAEMKTAQQVGTTVTVKKLFYNLLVRSKEFKRNIRKEYGKLVSLLNAYALIAKGVRFGCTNTTGKNAKSVVLKTQGNDSLKDNIITVLGMNTFNCLEPMSLCISESCEVDGFLSKPGLVPAIIDHIRDGVVKKVEEKGGLAKNLFQTAYNRRLAAVKGMSISSKFNKLTVLRLYSYFTVEEKASSACVSRILKQPPGKFISHAVDDVIKNFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMKDKALVRRLSACETMGSATTICSDKTGTLTLNQMTVDEAYVGRNNLNPSDDSSKFHPEALSLINESIAQNSAGNVFVSKDGGAVEVSGSPTEKAILSWAVKLGMNFDLIRSSSTVSSRQSREKTRRCCSEAGGLWSAYTLERSCRNNSRSMILRSYELDQIPSNEEDLNQWSLPEDELVLLAIVGIKDPCRPSVKDAMRICTEAGVKVRMVTGDNLQTAKAITMECGILASNEDVVEPNIIEGKVFRELSEQEREQLSRIKSKTSRLPAPMASVITRLSLQQNNRKPAKIKTKNNHLFQLVTETFFQNCRCHKFGEQVVASRILVRNPAFDVTPANLIFGIIAEKGVITKTNANDCF* 1320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2138 1319 Gene3D - 594 808 IPR036890 -
Psa2g2138 1319 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 612 715 - -
Psa2g2138 1319 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 682 688 IPR014762 -
Psa2g2138 1319 Gene3D - 1152 1200 IPR023214 -
Psa2g2138 1319 Gene3D - 851 998 - -
Psa2g2138 1319 Gene3D - 1240 1318 IPR042529 -
Psa2g2138 1319 CDD NBR1_like 2 43 IPR032350 -
Psa2g2138 1319 Gene3D Immunoglobulins 1 45 IPR013783 -
Psa2g2138 1319 Gene3D - 999 1091 IPR023299 GO:0000166
Psa2g2138 1319 ProSitePatterns E1-E2 ATPases phosphorylation site. 986 992 IPR018303 -
Psa2g2138 1319 Pfam Ig-like domain from next to BRCA1 gene 2 41 IPR032350 -
Psa2g2138 1319 MobiDBLite consensus disorder prediction 471 512 - -
Psa2g2138 1319 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 990 1156 IPR023299 GO:0000166
Psa2g2138 1319 PRINTS P-type cation-transporting ATPase superfamily signature 984 998 - -
Psa2g2138 1319 PRINTS P-type cation-transporting ATPase superfamily signature 1144 1155 - -
Psa2g2138 1319 PRINTS P-type cation-transporting ATPase superfamily signature 1166 1176 - -
Psa2g2138 1319 Coils Coil 472 492 - -
Psa2g2138 1319 MobiDBLite consensus disorder prediction 566 608 - -
Psa2g2138 1319 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 609 805 IPR036890 -
Psa2g2138 1319 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 921 1014 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa2g2138 1319 Pfam NAD-specific glutamate dehydrogenase 327 374 IPR019651 -
Psa2g2138 1319 CDD HATPase_MutL-MLH-PMS-like 611 781 - -
Psa2g2138 1319 PANTHER CALCIUM-TRANSPORTING ATPASE 9, PLASMA MEMBRANE-TYPE 888 1078 - -
Psa2g2138 1319 PANTHER CALCIUM-TRANSPORTING ATPASE 9, PLASMA MEMBRANE-TYPE 1113 1222 - -
Psa2g2138 1319 Pfam NOP5NT (NUC127) domain 279 332 IPR012974 -
Psa2g2138 1319 SUPERFAMILY HAD-like 972 1200 IPR036412 -
Psa2g2138 1319 SUPERFAMILY NagB/RpiA/CoA transferase-like 1276 1314 IPR037171 -
Psa2g2138 1319 MobiDBLite consensus disorder prediction 457 516 - -
Psa2g2138 1319 MobiDBLite consensus disorder prediction 566 597 - -
Psa2g2138 1319 SUPERFAMILY Calcium ATPase, transmembrane domain M 924 978 IPR023298 -
Psa2g2138 1319 Pfam haloacid dehalogenase-like hydrolase 981 1198 - -
Psa2g2138 1319 PANTHER CATION TRANSPORTING ATPASE 888 1078 - -
Psa2g2138 1319 PANTHER CATION TRANSPORTING ATPASE 1113 1222 - -
Psa2g2138 1319 Gene3D - 1113 1151 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2138 Psa-Chr2 228716263 228721249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2138 920 1221 Primary Pumps ATPases AT3G21180 60.234 1.19e-112 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2138 - - gmx:100802659 410.223