Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2137 ATGGCCAACGATACTCCTAGTTGTGATTTTCATAACAAACGTCTTGGTCTTTTAAAAGATCAAGTTCATTTGGTGAAAAGGAAAGATTCTAATCGCTATGAGATTGCTGCGATACAAGATCAACTATCATTTGAGAAGGGTTTTTTTATAGTTATTCGTGCATGTCAATTGTTGGCTCAAAAGAATGATGGAATTATATTAGTTGGGGTGGCGGGTCCTTCGGGAGCAGGGAAGACTATATTTACTGAGAAGATACTTAACTTCATGCCTAGTGTTGCTGTTATTTCGATGGATAATTACAATGATGCTAGTCGAATTGTTGATGGAAACTTTGATGATCCACGCTTAACTGACTATGACACATTGCTCCAGAATTTACAAGATTTAAAGGAAGGAAAGACAGTCCAGGTTCCGATATATGATTTCAAGTCCAGTTCACGCGTAGGATACAGGACTGTAGAACCCCCGACATCCAATATTGTGATTATAGAGGGTATCTATGCTTTGAGCGAGAAGTTGCGAACTTTGCTGGACCTTCGAGTTTCTGTTACAGGTGGAGTTCACCTTGACCTTGTAAAGCGAGTTATTCGTGACATACAACGTGCTGGCCAAGAGCCTGAAGAAATTATTCATCAAATATCTGAGACGGTATATCCGATGTACAAGGCTTTCATTGAGCCAGATCTCAAGACGGCGCATATAAAAATTACCAACAAATTTAATCCATTTACTGGATTCCAGAGCCCGACTTACATTTTAAAGTCAGCAAAGAATGTAGCAGTTGATCAAATTAAAGCTGTTCTCTCCGAAGATTGTCTGGAAACAACCGAGCAAACTTATGATATATATCTTCTACCTCCTGGTGAAGATCCAGAAACATGCCAATCATATTTAAGAATGCGAAACAAGGATGGGAAATACAGTCTCATGTTTGAGGAATGGGTGACAGACAATCCCTTTGTCATATCGCCGAGAATTACTTTTGAGGTCAGTGTGCGCCTCCTTGGTGGACTAATGGCCTTGGGATACACGATAGCTACTATCCTTAAGAGAAACAGCCATGTCTTTTCTGATGATAAGGTTTGTGTGAAACTAGATTGGCTTGAGCAACTTAATCGACATTATGTTCAGGTACAGGGGAGAGATCGCTTAGTTTTGAAAGAGATTGGAGATCAGCTGGGTCTCGAAGGTTCCTACATTCCTCGTACATACATTGAGCAAATTCAACTTGAAAGGCTTGTGAATGAGGTTATGGCTCTACCAGATGATTTGAAGACAAAGCTCAGCCTAGATGAGGATTTGGTTTCAAGCCCCAAAGAAGCACTTTCTAGAGCCTCTGCTGACAGGGTTGCCATGAGAAATGAGAATATGAGGAGTGGATTGTCACAGTCATATACAAATCAAAGGGACAAAAATGCAGCCAAAGTTAATGGATATTTTACCAACAATCGAGGGTTTGATGAAAGAAATTCAGATTCCTCCACAACACAATTAAATCAGAGAGCCATTAGTCAGCTTTCAGAACAGATTTCCGCTCTCAATGATAGAATGGATGAATTTACAAATCGTATTGAAGAGTTGAATAGCAAGCTGACCATTAGGAATAAGTCTCCAAGCCAACAAAATATGTTGGCTCAAGCCGAAGCTTGCAATGGTTCTGCTCCCACGTCTTACTTCATCAACAGTCTGGGAAATGGTAGCATAACTGGTTATAAGATGCCACATTCCTCGTCTTCATCCCAATTAAATAAGGAGTCTCCCTTAATAGATGAGATATCAGGCATCACACGTGGCCAGCGTCAGATCATGCATCAAATGGACAATCTAAATAATCTTCTTCGGGGTGGTTTAGGGGAAAGGTCTCAGCAAACAAGAATCAACAACAAGAGCATAATTACAGATTTGAATTACATTGGAGCGAGCATTGTAGTGGTAATCGCAGTTGGTTGTTTGGGGATCTTTTTGACCCGAAAGTGA 1977 0.4041 MANDTPSCDFHNKRLGLLKDQVHLVKRKDSNRYEIAAIQDQLSFEKGFFIVIRACQLLAQKNDGIILVGVAGPSGAGKTIFTEKILNFMPSVAVISMDNYNDASRIVDGNFDDPRLTDYDTLLQNLQDLKEGKTVQVPIYDFKSSSRVGYRTVEPPTSNIVIIEGIYALSEKLRTLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLKTAHIKITNKFNPFTGFQSPTYILKSAKNVAVDQIKAVLSEDCLETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDDKVCVKLDWLEQLNRHYVQVQGRDRLVLKEIGDQLGLEGSYIPRTYIEQIQLERLVNEVMALPDDLKTKLSLDEDLVSSPKEALSRASADRVAMRNENMRSGLSQSYTNQRDKNAAKVNGYFTNNRGFDERNSDSSTTQLNQRAISQLSEQISALNDRMDEFTNRIEELNSKLTIRNKSPSQQNMLAQAEACNGSAPTSYFINSLGNGSITGYKMPHSSSSSQLNKESPLIDEISGITRGQRQIMHQMDNLNNLLRGGLGERSQQTRINNKSIITDLNYIGASIVVVIAVGCLGIFLTRK* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2137 658 Gene3D - 254 412 - -
Psa2g2137 658 Coils Coil 503 530 - -
Psa2g2137 658 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
Psa2g2137 658 PANTHER URIDINE KINASE 6 650 - -
Psa2g2137 658 CDD UMPK_like 67 239 - -
Psa2g2137 658 PANTHER PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN 6 650 - -
Psa2g2137 658 Gene3D - 66 253 IPR027417 -
Psa2g2137 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 238 IPR027417 -
Psa2g2137 658 Pfam CYTH domain 253 404 IPR023577 -
Psa2g2137 658 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Psa2g2137 658 PRINTS Uridine kinase signature 65 82 - -
Psa2g2137 658 PRINTS Uridine kinase signature 132 147 - -
Psa2g2137 658 PRINTS Uridine kinase signature 188 198 - -
Psa2g2137 658 PRINTS Uridine kinase signature 224 237 - -
Psa2g2137 658 SUPERFAMILY CYTH-like phosphatases 264 407 IPR033469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2137 Psa-Chr2 228659677 228667983 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2137 66 236 PRT Gene Family AT4G26510 29.444 8.49e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2137 K00876 - gmx:100781286 1090.1