Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2134 ATGGTAGCAAATGATGGATCAAGCTTAAGTGTTCTCATTGTTTATAGATTTGTATTTTCTACTGCTTTCACTGTGCCATTTGTTTTCTTCTTTGAAAGGAAAAGTGTGCAAAATTTGACTGGAAAGGTGTTATTCCAAGCTTTTCTTTGTGGATTATTTGGGGGATCATTACAACAAAACTTGTATATTAAATCTTTGGCTTTGGTATCTGCAACATATACTATAACCATGTTAAACCTCATTCCTGCCATTACCTATGTCCTGGCTGTTTCTCTAAGAATGGAGAAGCCAAATCTTGGAACACCGGCTGGGAAAGCGAAGTTGATGGGAACATTAAGTGGAATTGGTGGTGCAATGATCCTAACTTTATATGAAGGCAAAAGATTATTTAACTTATCATTGCACATTGACTTGCTGCAAAATGCTACATCAACAACACATCATTCCCCTGCTGGTTCTCATGTTTGGGGACTCATGCTAGCTTTAGGCACTGCTCTCAGTTTCTCATTATGGTTTATAACACAGAGACAAGCGGATGTGAACTCGTTGATGTTGTTATTGGCGTTGTTATGCCATTTGTTTCCGTTGCTGTTCACGTACAGCGCTGCTTCGGCTGAACTCACCGTAGAGCCTTCGCTGTATTTGTCGAGAGCTTCTAGCATTGTTATGCTGGTTGCGTATTTTGCTTACTTGATCTTTCAATTATGGACGCATAGGCAATTATTTGAAGCGGAAGATGAAGGGGAAGGTGAGAACAATGAAGCGGAAGAAGAGGCTGTGATTGGATTCTGGAGTGGATTTGCTTGGTTGGCTGGAATGACTGTGTTCATTGCTTTGTTGTCTGAATATGTGGTGGATACAATTGAGGCTGTGATTGGATTCTGGAGTGGATTTGCTTGGTTGGCTGGAATGACTGTGTTCATTGCTTTGTTGTCTGAATATGTGGTGGATACAATTGAGGATGCATCAGATTCATGGGGTTTATCTGTGAGCTTCCTCAGCATAATCTTGCTTCCGATAGTTGGCAATGCGGCTGAACATGCAGGAGCAATCATTTTCGCTTTCAAGAACAAGCTGGACATTTCCTTAGGTGTTGCATTGGGCTCTTCCACTCAAATTGCCTATTTCCTTATTTTTAACCCGGCATCTTCTCACAACCCTCGGTTAAGATTGAAGGCTTTCTTTACATCTTTATACAAATGTTTGTCCAATGGTGCTAAAGCTGTTTTTCAAGTGTATCCTGAAAATAATGACCAGCGTGAATTGATTATGAATGCTGCAATGCATGCTGGGTTTGCTGGTGGCATAGTGGTGGATTTTCCACACAG 1328 0.4096 MVANDGSSLSVLIVYRFVFSTAFTVPFVFFFERKSVQNLTGKVLFQAFLCGLFGGSLQQNLYIKSLALVSATYTITMLNLIPAITYVLAVSLRMEKPNLGTPAGKAKLMGTLSGIGGAMILTLYEGKRLFNLSLHIDLLQNATSTTHHSPAGSHVWGLMLALGTALSFSLWFITQRQADVNSLMLLLALLCHLFPLLFTYSAASAELTVEPSLYLSRASSIVMLVAYFAYLIFQLWTHRQLFEAEDEGEGENNEAEEEAVIGFWSGFAWLAGMTVFIALLSEYVVDTIEAVIGFWSGFAWLAGMTVFIALLSEYVVDTIEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSSTQIAYFLIFNPASSHNPRLRLKAFFTSLYKCLSNGAKAVFQVYPENNDQRELIMNAAMHAGFAGGIVVDFPH 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2134 442 Pfam EamA-like transporter family 12 104 IPR000620 GO:0016020|GO:0016021
Psa2g2134 442 Pfam Sodium/calcium exchanger protein 297 377 IPR004837 GO:0016021|GO:0055085
Psa2g2134 442 Gene3D Vaccinia Virus protein VP39 369 442 IPR029063 -
Psa2g2134 442 SUPERFAMILY Multidrug resistance efflux transporter EmrE 15 125 - -
Psa2g2134 442 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 141 290 - -
Psa2g2134 442 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 289 378 - -
Psa2g2134 442 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 141 290 IPR004713 GO:0006812|GO:0008324|GO:0016021
Psa2g2134 442 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 289 378 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2134 Psa-Chr2 228376062 228379125 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2134 138 378 Antiporters AT2G38170 51.394 5.05e-63 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2134 K07300 - mtr:MTR_4g094360 292.737