Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2108 ATGTTGATACTCCCGGATCATCTTTACGGAATGAACTATACGGTTATGATCCCGCAACCTGCAACAAACAACAAAGGGCAAGGCAAAACCGTGAAACAACCCACAAGAGAAACAGAGAATACATTCGAGATGGCACAACATCAAATTTTACCTTGCAAATTGCAATCAAAAGCAGCGAACCAGGCTATTGTTGAGGCGATGGAAGGGGAGAAAATGATTCACATAATCGATCTCAATGCTGCTGAACTTGCTCAGTGGATTGCACTTCTCCAGTTTGAGTCGCGTCCTGAGAGCCCTCCGCATTGA 306 0.4477 MLILPDHLYGMNYTVMIPQPATNNKGQGKTVKQPTRETENTFEMAQHQILPCKLQSKAANQAIVEAMEGEKMIHIIDLNAAELAQWIALLQFESRPESPPH* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2108 101 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 59 101 IPR005202 -
Psa2g2108 101 Pfam GRAS domain family 45 101 IPR005202 -
Psa2g2108 101 ProSiteProfiles GRAS family profile. 1 101 IPR005202 -
Psa2g2108 101 PANTHER BNAA06G02820D PROTEIN 59 101 IPR030008 GO:0003700|GO:0005634|GO:0009739
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2108 Psa-Chr2 224645568 224645873 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2108 60 101 GRAS Transcription Factor Family AT1G50420 74.419 2.55e-16 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Psa2g2108 GRAS 3.2e-14 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2108 - - thj:104826488 72.4034