Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2105 ATGGCAGCAGAAGGTAGAGTAGTAGAGCATCCTAAGAAGGCCTTTGGATGGGCAGCTAGAGATCCTTCTGGTGTTCTTTCCCCTTTCAATTTCTCCAGAAGGGAAACAGGTGAGAAAGATGTAGCATTCAAGGTGTTGTATTGTGGGATATGTCACTCTGATCTTCATATGGCCAAAAATGAATGGGGAACTTCCATCTATCCACTTGTTCCTGGGCACGAGCTTGTGGGTGTAGTAACTGAGGTGGGAAGCAAGGTAGAAAAGTTTAAAGTTGGAGACAATGTCGGTGTGGGCTACATGATCGATTCGTGCCGATCATGCCAAAATTGTGATGATGATCTTGAAAATTACTGCCCCAAGTATACAACCACTTGTGGTGGGAAATATCGTGATGGAACTGTCACATATGGAGGTTACTCTGACTCAATGGTTGCAGACGAGCATTTTGTAGTCCTCATTCCTGATAGCTTATCTCTTGATATTGCTGGTCCTCTCCTATGTGCTGGTATAACAGTATATAGTCCTCTAAAATACTATGGACTCGACAAACCTGGTCTGCGTATAGGCATTGTTGGTCTCGGTGGACTTGGCCATATGGCTGTGAAATTCGCCAAAGCGTTTGGTGCTAATGTGACTGTAATTAGTACTTCGCCTAACAAAGAAAATGAAGCAATAGAACACTTAGGAGCTGATTCATTTCTGATAAGCCGTGACCCGAATCAGTTGATGGCTGCAATGGGTACTTTGGATGGTATTATTGACACAGTTTCAGCTGGTCATCCTATCTTACCACTGATTGGTTTATTGAAATCTCATGGAAAGCTTGTTATGCTTGGTGTAATAGTAAAGCCTGTAGATCTTCCTGTATATGCTTTACTTGGAGGGAGAAAATTATTAGGTGGGAGTATGATTGGAGGGATAAAGGAGACTCAAGAAATGATTGATTTTGCTGCTAAACACTATGTGAAACCTGATATTGAGGTTGTTCCGATTGATTATGTTAACACTGCAATGGAGCGTCTTGCTAAAGGAGATAGAAATGAAAAGGCTGCTGCTGTTAAGGAGCTTAAGTCCCCTGCTAAGTCGAAATTTACCCTTGATCCCGTTTCCCTCTTTTAA 1119 0.4227 MAAEGRVVEHPKKAFGWAARDPSGVLSPFNFSRRETGEKDVAFKVLYCGICHSDLHMAKNEWGTSIYPLVPGHELVGVVTEVGSKVEKFKVGDNVGVGYMIDSCRSCQNCDDDLENYCPKYTTTCGGKYRDGTVTYGGYSDSMVADEHFVVLIPDSLSLDIAGPLLCAGITVYSPLKYYGLDKPGLRIGIVGLGGLGHMAVKFAKAFGANVTVISTSPNKENEAIEHLGADSFLISRDPNQLMAAMGTLDGIIDTVSAGHPILPLIGLLKSHGKLVMLGVIVKPVDLPVYALLGGRKLLGGSMIGGIKETQEMIDFAAKHYVKPDIEVVPIDYVNTAMERLAKGDRNEKAAAVKELKSPAKSKFTLDPVSLF* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2105 372 Gene3D - 168 324 - -
Psa2g2105 372 Pfam Alcohol dehydrogenase GroES-like domain 39 151 IPR013154 -
Psa2g2105 372 PANTHER ALDEHYDE REDUCTASE 6 346 - -
Psa2g2105 372 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 72 86 IPR002328 GO:0008270|GO:0016491
Psa2g2105 372 Gene3D - 17 346 - -
Psa2g2105 372 Pfam Zinc-binding dehydrogenase 195 318 IPR013149 -
Psa2g2105 372 CDD CAD1 15 345 - -
Psa2g2105 372 SUPERFAMILY GroES-like 20 185 IPR011032 -
Psa2g2105 372 SMART PKS_ER_names_mod 24 352 IPR020843 GO:0016491
Psa2g2105 372 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 6 346 - -
Psa2g2105 372 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 322 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2105 Psa-Chr2 223045968 223050037 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2105 5 345 Monolignol Biosynthesis Gene Families AT4G37990 68.622 1.37e-155 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2105 - K23232 gmx:100816901 565.074