LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa2g2104	ATGGTGAAGAATGAATGGGGCGTCTCCACGTATCCATTAGTTCCTGGGCATGAGATTGCTGGTATAGTGACAGAAGTGGGAAGCAAAGAAAGTCTCGAGAATTATTGCCCTCGATCTACACTCACATATGGTGCTAAACATGGTGATGGAACAATCACTCATGATGTGAGGAAAGTCTCGAGAATTATTGCCCTCGATCTACACTCACATATGGTGCTAAACATGGTGATGGAACAATCACTCATGGAGGCTACTCTGACTCAATGCTTACCGCTTGAAGCCGCTGCACCTTTCCTTTGTGCTGGCATCACTGTCTATAGTCCTCTAAGATATTTTGGACTCCATAAACCCGGGCTTCATGTAGGTGTTGTTGGGCTTGGTGGGCTTGGTCACATGGTTGTTAAGTATGCCAAAGCTTTTGGTGCTAATGTTACTGTAATTAGTACTTCACCTAACAAAGAAAAAGAAGCATTAGAACACTTGGGTGCTGACTCATTTCTGATAAGCCGCCACCAAGATAAAATGCAGGCTGAAGTGGGTACTTTAGATGGTATCATTGATACAGTTTCTGCGAATCATCCAATTGTGCCTCTAATTGGATTACCGAAGTCTCATGGAAAACTGGTAATGGTTGGTGCACCAGATAAGCCTTTGGAGCTTCCTGTCTTTCCTTTACTTCAAGGAAGAAAGTTGGTTGCTGGAAGTGCGATTGGAGGGTTGAAGGAGACTCAAGAGATGGTTGATTTTGCTGCTAAACACAGTGTGAAACCTGATGTTGAAGTTATTCTTGTGGATTATGTTAACACCGCATTTGAGCGACTCTTGAAAGCAGATGTCAAATATCGATTTGTGATTGACATTGGAAACACTTTGAAACCAGCTTCTTAA	888	0.4279	MVKNEWGVSTYPLVPGHEIAGIVTEVGSKESLENYCPRSTLTYGAKHGDGTITHDVRKVSRIIALDLHSHMVLNMVMEQSLMEATLTQCLPLEAAAPFLCAGITVYSPLRYFGLHKPGLHVGVVGLGGLGHMVVKYAKAFGANVTVISTSPNKEKEALEHLGADSFLISRHQDKMQAEVGTLDGIIDTVSANHPIVPLIGLPKSHGKLVMVGAPDKPLELPVFPLLQGRKLVAGSAIGGLKETQEMVDFAAKHSVKPDVEVILVDYVNTAFERLLKADVKYRFVIDIGNTLKPAS*	296

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa2g2104	295	PANTHER	CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN	1	29	-	-
	Psa2g2104	295	PANTHER	CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN	30	293	-	-
	Psa2g2104	295	Gene3D	-	101	257	-	-
	Psa2g2104	295	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	90	256	IPR036291	-
	Psa2g2104	295	SUPERFAMILY	GroES-like	2	133	IPR011032	-
	Psa2g2104	295	CDD	CAD1	1	286	-	-
	Psa2g2104	295	Pfam	Zinc-binding dehydrogenase	128	251	IPR013149	-
	Psa2g2104	295	PANTHER	ALDEHYDE REDUCTASE	1	29	-	-
	Psa2g2104	295	PANTHER	ALDEHYDE REDUCTASE	30	293	-	-
	Psa2g2104	295	Gene3D	-	1	32	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa2g2104	Psa-Chr2	222979707	222995776	Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa2g2104	1	293	Monolignol Biosynthesis Gene Families	AT4G37990	56.740	1.42e-105	310

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa2g2104	-		K23232	gmx:100809071	388.652

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