Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2097 ATGAAGATGGAATGTGGCATGGATAAAAGGGTTCTCTTGTTGTGGTGGTATATAATTGTTTGTCAGCTTTGTTTCATTCTTGGTGCTTATTCTGAGGATTTTTCATTCAGAAGAAACTTGAGGATATTCGACAACCCAGAATCGTCGAGTGCTAATTCTCTGGTCACTCTTAATAATCAAAATTCTGCACAGGTGGTGATTAGCAATGGAATAATTTCCCTCACTTTGTCCAACCCTAGAGGGTATGTCAAAGGAGTATCATATGCTGGAATAGACAATGTACTTGATGAAAAAAATGAAGAAAATGATAGAGGGTACTTGGACATTTCTTCTGGCAAGTTAACTCAAAGAGTTCATGGGACACATTTCTCAGTCATAACACACAAGGAGAATATAGTTGAGGTTTCATTTTTAAGGACATGGAGATCTTCCATGGATGCCTCAAATGTACCTATAAACATGGACCAAAGGTATATAGTACGAAGTGGTGATTCGGGGTTTTATTCTTATGTGATATTTGAACGGCCAAAAGGATTCCCTGCCATTACCATTGATCAAATAAGGATGGTATATAAGTTAAATGAAGCCAGGTCCGATGATAACTCATGTGGTTTCTCGGACTGGTGTGAGAACCTTATTCTGTT 644 0.3804 MKMECGMDKRVLLLWWYIIVCQLCFILGAYSEDFSFRRNLRIFDNPESSSANSLVTLNNQNSAQVVISNGIISLTLSNPRGYVKGVSYAGIDNVLDEKNEENDRGYLDISSGKLTQRVHGTHFSVITHKENIVEVSFLRTWRSSMDASNVPINMDQRYIVRSGDSGFYSYVIFERPKGFPAITIDQIRMVYKLNEARSDDNSCGFSDWCENLIL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2097 214 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 56 197 - -
Psa2g2097 214 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 56 197 - -
Psa2g2097 214 Pfam Rhamnogalacturonate lyase family 50 197 IPR010325 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2097 Psa-Chr2 221047820 221051921 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2097 55 199 Polysaccharide Lyase AT2G22620 46.667 8.90e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2097 K18195 - gmx:100776664 212.231