Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2073 ATGGGATCCTCCGCGATGGTTTTAGACCCAAAACCCGTCTCAGAACCGCCGCCTTCTCTTCTATCATCAAAATCCGATTACCTTTACGGTGGCGACTCAGCCTCCGATGAAGATGACCTCTACAGCCGCCTCAAATCTCTGCAGCGACAACTAGAGTTCATCGACATCCAAGAGGAGTATGTAAAAGATGAACAGAAGAATCTAAAGCGCGAGCTTCTTAGGGCTCAGGAAGAAGTTAAGAGGATTCAATCTGTTCCACTCGTTATCGGTCAGTTCATGGAGATGGTTGATCAGAACAACGGTATTGTTGGATCAACTACTGGATCCAACTACTATGTCAGGATTCTCAGTACTATCAACCGTGAGCTTCTCAAGCCTTCTGCTTCGGTTGCTCTTCACCGACATTCCAATGCACTTGTTGATGTTCTTCCGCCGGAGGCTGATTCTAGTATCTCGCTCCTTAGCCAGTCTGAGAAGCCTGATGTTTCTTACAATGATATTGGAGGATGTGATATCCAAAAGCAGGAAATTCGCGAGGCTGTGGAGTTACCTCTCACACATCACGATTTATACAAGCAAATTGGTATTGATCCTCCTCGAGGTGTTTTACTATATGGCCCCCCTGGAACCGGTAAAACAATGCTTGCCAAAGCTGTTGCTAATCATACCACTGCCGCCTTTATCAGGGTTGTGGGCTCTGAGTTTGTGCAGAAGTATCTTGGCGAGGTATGA 732 0.4658 MGSSAMVLDPKPVSEPPPSLLSSKSDYLYGGDSASDEDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHDLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEV* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2073 243 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 26 242 - -
Psa2g2073 243 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 6B HOMOLOG 26 242 IPR035256 GO:0036402
Psa2g2073 243 Coils Coil 58 85 - -
Psa2g2073 243 Pfam ATPase family associated with various cellular activities (AAA) 202 242 IPR003959 GO:0005524|GO:0016887
Psa2g2073 243 Gene3D - 155 243 IPR027417 -
Psa2g2073 243 Gene3D - 41 154 IPR012340 -
Psa2g2073 243 CDD AAA 168 242 - -
Psa2g2073 243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 243 IPR027417 -
Psa2g2073 243 MobiDBLite consensus disorder prediction 1 28 - -
Psa2g2073 243 Pfam Proteasomal ATPase OB C-terminal domain 89 144 IPR032501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2073 Psa-Chr2 214716090 214717721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2073 158 242 Calmodulin-binding Proteins AT3G56690 44.706 2.31e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2073 K03063 - gmx:100783650 429.869