Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa2g2062 | ATGGCTCGTGCTAGTACTACTAACTCAAATAACTGGTTATCGTTTTCACTCTCACCCATGGAAATGCCTCAGTTTGTTCAATACGACGCCGCTTCATCTGTTACTAACTCGTCTCATCAGAATCATCATCACTATTTTCTTGACAATATGTATTCTAATGGATGGGGAAACGGAAACTCAAAGACTGAAGCTGAAGCACAGGAACAATCGATTTGGTTTATGGATTCATCTAACGGACAGAGTGTGAACCACCACGCTCCACCGCCGAAGCTGGAGGATTTTCTCGGTGACAGTCAAACGGAGACGCAAGATTCTTCTCTTACTCACATGTACGATCACCATCAGCACCATCACCATGGTTCTACTTACTTCGGTGGGGACCACCACCATCAACACCAGCAACAGCAACAGCACCAGCATCAGCAGCACCACCAGCATCAGGATCTTAAGAGCATTACTGGCTTTCAAGCCTTTTCAAACAACTCAGGTTCTGAAGTTGATGATTCAGGTTCAATAGGAAAATCACAAGCTGCATGTAACGAGTTTGGAACTCATTGTGTTGAGTCAGGTAACGAGTTTACTTACTCCACCGCCGCCGCCACCGCCACCGCTAGTGGTGCTTTGTCCCTCGGCGTTGCTCAGAACTCCGAAGAAACTGCTATCACTGTTGCTGATTCAGATAGTTCCAAGAAAATCGTTGATACTTTTGGTCAGCGAACTTCGATTTACCGTGGTGTCACTAGGCATAGATGGACGGGTAGATATGAAGCGCATCTATGGGATAACAGCTGTAGAAGAGAAGGCCAAGCCAGGAAAGGGCGTCAAGTCTATTTGGGTGGATATGACAAGGAAGAAAAGGCCGCAAGATCCTATGATTTGGCTGCTCTAAAGTATTGGGGTCCTACTGCTACTACCAACTTCCCTGTTTCCAGTTATGCAAAGGAATTGGAAGAGATGAAAGTAGTAACAAAGCAAGAATTCATTGCGTCATTGCGAAGGAAGAGTAGTGGCTTTTCAAGAGGAGCTTCCATCTATAGGGGTGTTACAAGGCATCACCAACAGGGTAGATGGCAAGCAAGAATCGGCCGTGTTGCCGGAAACAAAGACTTGTACTTGGGAACATTCGGTAAACATTTTAGCTTAAATTACTAG | 1152 | 0.4549 | MARASTTNSNNWLSFSLSPMEMPQFVQYDAASSVTNSSHQNHHHYFLDNMYSNGWGNGNSKTEAEAQEQSIWFMDSSNGQSVNHHAPPPKLEDFLGDSQTETQDSSLTHMYDHHQHHHHGSTYFGGDHHHQHQQQQQHQHQQHHQHQDLKSITGFQAFSNNSGSEVDDSGSIGKSQAACNEFGTHCVESGNEFTYSTAAATATASGALSLGVAQNSEETAITVADSDSSKKIVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEEKAARSYDLAALKYWGPTATTNFPVSSYAKELEEMKVVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFGKHFSLNY* | 384 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa2g2062 | 383 | SUPERFAMILY | DNA-binding domain | 343 | 377 | IPR016177 | GO:0003677 | |
Psa2g2062 | 383 | CDD | AP2 | 241 | 310 | IPR001471 | GO:0003700|GO:0006355 | |
Psa2g2062 | 383 | Pfam | AP2 domain | 242 | 300 | IPR001471 | GO:0003700|GO:0006355 | |
Psa2g2062 | 383 | ProSiteProfiles | AP2/ERF domain profile. | 344 | 383 | IPR001471 | GO:0003700|GO:0006355 | |
Psa2g2062 | 383 | ProSiteProfiles | AP2/ERF domain profile. | 242 | 308 | IPR001471 | GO:0003700|GO:0006355 | |
Psa2g2062 | 383 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 9 | 376 | - | - | |
Psa2g2062 | 383 | SUPERFAMILY | DNA-binding domain | 241 | 310 | IPR016177 | GO:0003677 | |
Psa2g2062 | 383 | SMART | rav1_2 | 344 | 382 | IPR001471 | GO:0003700|GO:0006355 | |
Psa2g2062 | 383 | SMART | rav1_2 | 242 | 314 | IPR001471 | GO:0003700|GO:0006355 | |
Psa2g2062 | 383 | Gene3D | AP2/ERF domain | 344 | 379 | IPR036955 | GO:0003700|GO:0006355 | |
Psa2g2062 | 383 | Gene3D | AP2/ERF domain | 242 | 310 | IPR036955 | GO:0003700|GO:0006355 | |
Psa2g2062 | 383 | MobiDBLite | consensus disorder prediction | 124 | 149 | - | - | |
Psa2g2062 | 383 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 | 9 | 376 | - | - | |
Psa2g2062 | 383 | PRINTS | Ethylene responsive element binding protein signature | 243 | 254 | IPR001471 | GO:0003700|GO:0006355 | |
Psa2g2062 | 383 | PRINTS | Ethylene responsive element binding protein signature | 290 | 310 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa2g2062 | Psa-Chr2 | 207519283 | 207524584 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa2g2062 | 73 | 375 | AP2-EREBP Transcription Factor Family | AT5G10510 | 59.091 | 1.82e-123 | 365 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-AP2 | Psa2g2062 | AP2 | 3.9e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa2g2062 | K09285 | - | gmx:100775390 | 504.212 |