Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa2g2019 | ATGACTAGCAATTGCCAAACTTCTGGTACTGGCCACAACATCAGGGGTTTAATCTCCAACGCTGGTGCTGGTGCAGCCGCTGGGGCAATAGCTGCTACGTTTGTATGTCCTTTGGATGTGATCAAGACAAGGCTACAAGTTCATGGCCTTCCCCCTGTGCAGAAAGGTAGTGTCATTGTCACGAGCTTGCAGAATATAGTTAGGACCGAAGGCTTCAGGGGAATGTACCGTGGCCTTTCACCAACAATACTGGCATTACTTCCAAACTGGGCAGTTTACTTCACATGTTATGAGCAACTAAAGGGCTTGCTTCGGTCACACGAGGGTTGCAACGAACTCACAACAATGGGAAATATTATAGCTGCTGCTGGTGCGGGGGCAGCAACAGCAATATCTACAAATCCTTTGTGGGTTGTTAAGACAAGACTCCAAACGCAAGGAATGAGGCCTAATGTTGTTCCTTACAAGAGTGTTCTTTCCGCTTTGACGAGGATTACACGTGAGGAAGGTCTACGAGGACTATATAGTGGCATTGTGCCATCATTAGCTGGCGTAAGTCATGTAGCGATTCAATTCCCAGCATACGAAAAGATAAAGTCATACATTGCGAAAAAAGATAACACAACTGTTGACAACCTTAGTCCTGGGAATGTTGCTATTGCGTCATCAATTTCAAAAGTAACTGCCTCTGTAATGACATATCCGCACGAGGTAATACGATCCCGGCTGCAAGAGCAAGGTCAAGCGAAAAATAGTAGTGGATTTCAATATGCCGGGGTTATTGACTGTGCTAAGAAGGTGTTTCAAAAGGAAGGCATTTCAGGATTTTATCGCGGTTGCGCAACTAATCTATTAAGAACAACTCCATCTGCTGTTATTACATTCACCAGTTATGAGATGATACACAGGTTTTTGACGCGGACTATACCACAAAATGAGCCTAAAAAACCCAAGCCAGAAGCCGGTGATATTAATACTAAAAATGGCGGTGACAGGGATCAATCGCCATCTCAATCTAACAATATTCCTCTCGGAAACAAAGAGCAGCTAACAAGACATTGA | 1062 | 0.4426 | MTSNCQTSGTGHNIRGLISNAGAGAAAGAIAATFVCPLDVIKTRLQVHGLPPVQKGSVIVTSLQNIVRTEGFRGMYRGLSPTILALLPNWAVYFTCYEQLKGLLRSHEGCNELTTMGNIIAAAGAGAATAISTNPLWVVKTRLQTQGMRPNVVPYKSVLSALTRITREEGLRGLYSGIVPSLAGVSHVAIQFPAYEKIKSYIAKKDNTTVDNLSPGNVAIASSISKVTASVMTYPHEVIRSRLQEQGQAKNSSGFQYAGVIDCAKKVFQKEGISGFYRGCATNLLRTTPSAVITFTSYEMIHRFLTRTIPQNEPKKPKPEAGDINTKNGGDRDQSPSQSNNIPLGNKEQLTRH* | 354 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa2g2019 | 353 | MobiDBLite | consensus disorder prediction | 328 | 353 | - | - | |
Psa2g2019 | 353 | PANTHER | NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC | 12 | 313 | - | - | |
Psa2g2019 | 353 | Gene3D | Mitochondrial carrier domain | 111 | 316 | IPR023395 | - | |
Psa2g2019 | 353 | Gene3D | Mitochondrial carrier domain | 3 | 110 | IPR023395 | - | |
Psa2g2019 | 353 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 113 | 201 | IPR018108 | - | |
Psa2g2019 | 353 | SUPERFAMILY | Mitochondrial carrier | 18 | 300 | IPR023395 | - | |
Psa2g2019 | 353 | MobiDBLite | consensus disorder prediction | 308 | 353 | - | - | |
Psa2g2019 | 353 | MobiDBLite | consensus disorder prediction | 313 | 327 | - | - | |
Psa2g2019 | 353 | Pfam | Mitochondrial carrier protein | 213 | 306 | IPR018108 | - | |
Psa2g2019 | 353 | Pfam | Mitochondrial carrier protein | 18 | 106 | IPR018108 | - | |
Psa2g2019 | 353 | Pfam | Mitochondrial carrier protein | 113 | 205 | IPR018108 | - | |
Psa2g2019 | 353 | PRINTS | Mitochondrial carrier protein signature | 20 | 33 | IPR002067 | GO:0055085 | |
Psa2g2019 | 353 | PRINTS | Mitochondrial carrier protein signature | 33 | 47 | IPR002067 | GO:0055085 | |
Psa2g2019 | 353 | PRINTS | Mitochondrial carrier protein signature | 78 | 98 | IPR002067 | GO:0055085 | |
Psa2g2019 | 353 | PRINTS | Mitochondrial carrier protein signature | 128 | 146 | IPR002067 | GO:0055085 | |
Psa2g2019 | 353 | PRINTS | Mitochondrial carrier protein signature | 222 | 244 | IPR002067 | GO:0055085 | |
Psa2g2019 | 353 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 15 | 103 | IPR018108 | - | |
Psa2g2019 | 353 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 213 | 304 | IPR018108 | - | |
Psa2g2019 | 353 | PANTHER | MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED | 12 | 313 | IPR044712 | GO:0006862|GO:0055085 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa2g2019 | Psa-Chr2 | 197506103 | 197514413 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa2g2019 | 33 | 347 | Chloroplast and Mitochondria Gene Families | AT1G25380 | 64.671 | 1.36e-146 | 417 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa2g2019 | K15115 | - | gmx:100797064 | 548.895 |