Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2007 ATGACTCAGAGGAGGAAAGCCCTTGTTAGAACCACAAGTGAATATAGCTCGGTTGATATACCCCACCTGTGTGTTCGCATTAATACTATGCAGCGTATTCGCATGGAATTAGGGGTTCTGGAAAAGAGGATAGTTGCCAATCTTAGTAGCTCTAATTCTGCCAATGAGGATAATATAGCAAATGGGGTGAGCTTCAAGTTTCCTGCAGTCGCTGCAGGGGAAGGTATCCGTCAACTCTGCGAGTGTATAGCATACAAAGCTATTTTTAAAGATCTCTGTCACGTTCTTTGGGATAACCTATATGTAGAAGAAGTTTCATCAGCCAGGATTGAGCCTTTTCTTAACGAGCTTGAGCAATACTTAGAGATCATATCATCAACAGTGCATGATAAATTCCCAATTGTTTCATCCATAAGAGCTGCATCATGGGTGAGGGAACCTGGAATTATTTTCAAGCATTTGCAAGTACCAGCCATATCTCCACATGTTGATTGTCGGCAGATGTCAGTATCTTGTAGCCAAGGCCCTGCAAGCCGTAACAAATGCAACCAGCGCCCTACGATACTCACTTTGAACTGCACTAGGTTGAATCGGGGTTTGTGGAAACAATATTACCAAAGCAGCAAGCTCCAAACGCAAGCCTGGAAATGTAAACAAAGAAAAAACATTCGTCTAGGTGACTTTGGTGTTGCGAAGCTACTTGACACTGACGGTCCTGCTTCTATGGTTGTTGGAACTCTAAGTTACATGTGTCCCGAGATCTTTGCTGATATGTCGTATGGTTATAAATCTGACATATGGTCGCTTGGTTGCTGCATGTTAGAAATTTTTGCACATCAACCAGCATTTCGCGCTCCTGACAACGCTGGACTTAACAATAAAATAAGTAGATCCGCTATTTCTCCATTGCCAATTGTTTACTCTTCCACACTGAAACAACTTATCAAGAGCATACTGAGGAAAAACCCTGAACACAAACCAACAGCGGCTGATTTGTTGAGACATGCACTCAACATCTCAAATGCCGGCACATTATGCTGA 1041 0.4265 MTQRRKALVRTTSEYSSVDIPHLCVRINTMQRIRMELGVLEKRIVANLSSSNSANEDNIANGVSFKFPAVAAGEGIRQLCECIAYKAIFKDLCHVLWDNLYVEEVSSARIEPFLNELEQYLEIISSTVHDKFPIVSSIRAASWVREPGIIFKHLQVPAISPHVDCRQMSVSCSQGPASRNKCNQRPTILTLNCTRLNRGLWKQYYQSSKLQTQAWKCKQRKNIRLGDFGVAKLLDTDGPASMVVGTLSYMCPEIFADMSYGYKSDIWSLGCCMLEIFAHQPAFRAPDNAGLNNKISRSAISPLPIVYSSTLKQLIKSILRKNPEHKPTAADLLRHALNISNAGTLC* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2007 346 Gene3D Transferase(Phosphotransferase) domain 1 207 343 - -
Psa2g2007 346 SMART serkin_6 132 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g2007 346 Pfam Protein kinase domain 218 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g2007 346 SUPERFAMILY Protein kinase-like (PK-like) 221 336 IPR011009 -
Psa2g2007 346 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 221 335 - -
Psa2g2007 346 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 221 335 - -
Psa2g2007 346 ProSiteProfiles Protein kinase domain profile. 1 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2007 Psa-Chr2 194765107 194766332 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2007 221 337 MAP Kinase Kinase Gene Family AT1G51660 34.921 9.39e-13 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Psa2g2007 Pkinase 4.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2007 K08857 - cam:101514261 202.986