Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1979 ATGCTGAGAATTCTCCCCTACAGAATAGGCAAAAAAGAATTTCAACTTTCTGAGTCCACAACAGTATTGGGCGAATCCGGGAATGCCAATTCTTCTGTATTGCCTAATGATAATGGAAACCAGAAAAAGAAGAATAACAGGAATAAGAAAAACAAACAGAAAGTAAAAGATATTTCATTCTTGCCTGCATTACCAACTGCAATATTGAAGGATGCCGGTCTTTCTACTAGCTCTGTTGAAAATAAACCCAGGGAAGACATCGAGTTAGATCAGGGATCACTTCAGTCGTCATCTCTGTATAAAGACCCAAACCAATATTCAAAGCAAAAATATTCAGAAATTGAAGAATCCCATGGTAAAATGAATAACCTGTTGAAATCACAGCATTCTCGAAGGATGCCAAGAAACATGCAGGCTAATAGAATAACAGAGAAATCCCATGGGAGTGATGCTTTGATGTGGGCACCTGTTAAACCACCAAACAAGGGCATCTTGGATGAATCAAGTGAGAAAAGTAAAATTGAGGCAATTGTTCCTGCAAAGAGTGATCAGCAGGTGCATAATTTAAGAAATAAGAGGGCTGAAAGGGAGAGATATATTCCAAAACCTGTTGCAAAAGAAATGGCTCAGCAAGAAAGTTCACAACAAATGGTATCCTCAATCAGTCAGGCTCCTGTTCTTCGTCTTGGCGCCCAGGGACGGGAAATAGATGAACATGGAAATGTTGTTAATATAACTAAGCCAAGCAACCTTAGCACATTAAAGAAAAAGAAGAATAACAGGAATAAGAAAAACAAACAGAAAGTAAAAGATATTTCATTCTTGCCTGCATTACCAACTGCAATATTGAAGGATGCCAGTCTTTCTACTAGCTCTGTTGAAAATAAACCCAGGGAAGACATCGAGTTAGATCAGGGATCACTTCAGTCGTCATCTCGGTATAAAGACCCAAACCAATATTCAAAGCAAAAATATTCAGAAATTGAAGAATCCCATGGTAAAATGAATAACCTGTTGAAATCACAGCATTCTCGAAGGATGCCAAGAAACATGCAGGCTAATAGAATAAGAGAGAAATCCTATGGGAGTGATGCTTTGATATGGGCACCTGTTAAACCACCAAACAAGGGCATATTGGATGAATCAAGTGAGAAAAGTAAAATTGAGGCAATTGTTCCTGCAAAGAGTGATCAGCAGGTGCATAATTTAAGAAATAAGAGGGCTGAAAGGGAGAGATATATTCCAAAACCTGTTGCAAAAGAATCAAGTGAGAAAAGTAAAATTGAGGCAATTGTTCCTGCAAAGAGTGATCAGCAGGATGAGTATCGACAAAACAAAGCTCCCGCTACTCCGGCTTCTGCCCCTGCTACTCCAGTTAATGCTACTCTACAAAATGGTGCTCCTGCATCTCAAATTCAGACTCCTACACACCAGCCTCCTCAAATTGATGATGCTCCTCCACAGTACAATTCGATGATTTTTGAAACTTTATCAACAATCAGAGATGCCATTGGGTCCGACTTGAGTGCTATTGTTAGCTTCATTGAGCAAAAGCACAACATTCCTCAAAACCATCCTTGCGCATCCATGAAACAATCCCAGACGTGGCAAACCAAAACCAAACTATAA 1629 0.3935 MLRILPYRIGKKEFQLSESTTVLGESGNANSSVLPNDNGNQKKKNNRNKKNKQKVKDISFLPALPTAILKDAGLSTSSVENKPREDIELDQGSLQSSSLYKDPNQYSKQKYSEIEESHGKMNNLLKSQHSRRMPRNMQANRITEKSHGSDALMWAPVKPPNKGILDESSEKSKIEAIVPAKSDQQVHNLRNKRAERERYIPKPVAKEMAQQESSQQMVSSISQAPVLRLGAQGREIDEHGNVVNITKPSNLSTLKKKKNNRNKKNKQKVKDISFLPALPTAILKDASLSTSSVENKPREDIELDQGSLQSSSRYKDPNQYSKQKYSEIEESHGKMNNLLKSQHSRRMPRNMQANRIREKSYGSDALIWAPVKPPNKGILDESSEKSKIEAIVPAKSDQQVHNLRNKRAERERYIPKPVAKESSEKSKIEAIVPAKSDQQDEYRQNKAPATPASAPATPVNATLQNGAPASQIQTPTHQPPQIDDAPPQYNSMIFETLSTIRDAIGSDLSAIVSFIEQKHNIPQNHPCASMKQSQTWQTKTKL* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1979 542 MobiDBLite consensus disorder prediction 433 457 - -
Psa2g1979 542 MobiDBLite consensus disorder prediction 22 53 - -
Psa2g1979 542 PANTHER PROTEIN MODIFIER OF SNC1 1 25 224 - -
Psa2g1979 542 PANTHER PROTEIN MODIFIER OF SNC1 1 246 454 - -
Psa2g1979 542 MobiDBLite consensus disorder prediction 288 324 - -
Psa2g1979 542 MobiDBLite consensus disorder prediction 90 105 - -
Psa2g1979 542 MobiDBLite consensus disorder prediction 75 105 - -
Psa2g1979 542 MobiDBLite consensus disorder prediction 247 271 - -
Psa2g1979 542 PANTHER PROTEIN MODIFIER OF SNC1 1 25 224 IPR038808 -
Psa2g1979 542 PANTHER PROTEIN MODIFIER OF SNC1 1 246 454 IPR038808 -
Psa2g1979 542 MobiDBLite consensus disorder prediction 22 41 - -
Psa2g1979 542 MobiDBLite consensus disorder prediction 304 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1979 Psa-Chr2 190677336 190679533 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1979 487 525 Single Myb Histone (SMH) Gene Family AT1G17520 56.410 4.49e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1979 - - cam:101488646 241.506