Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1948 ATGGCTGCAACTATGATAGGAGGTGCTTTTCTCTCTGCAACTGTTGAAATCTTACTTGAGAAACTTGCCTCAACAGAGTTTCTTGATTACATCACAAACACCAAGCTCAATGTCTCCCTCTTGAGAAAGTTACAAACAACCCTGCTCACTCTTGCGGCCGTGCTGGATGATGCAGAAGAGAGGCAGATCAACAATCTTGCTGTCAAAAAATGGCTAGATGACTTGAAAGATGTTGTCTTAGATGCTGAGGATTTGGTCAATCAAATAAGTTATGATTCCCTTCGGTGCAAGATGGAGAATAGACAAGCTGGAAACAGAACTAATCAGGTGTGGAATTTATTTTCATCTCCTTTCAAAAACTTGTATAGAGATATCAATTCCCAACTGAAGATCATGTGTGAAACCCTTGAACCTTTTGCACAACATAAAGATACCCTTGGATTGCAAACAAAAAGTGCAAGAGTTTCTCGAAGACCACCTTCAAGTTCAGGGGTTAATGAATCTGTCATGGTCGGTAGGAACGATGATAAAGATACAATCATCAATATGCTTGTATCAGACTGTGGCATCAGCAAAAATAATAACTTAGGTGTTGTTGCAATTTTGGGTATGGGAGGTCTCGGAAAAACGGCCCTCGCCCAACTGGTTTACAACAGTGAAAAAGTTGAACAACATTTTGATTTCAAAGTCTGGGTTTGTGTATCCGAGGACTTTGATGTTTTGAGAGTAACCAAGTCTCTCCTTGAATCTGTTGTTAGAAATACAACATCCGCAGCTTCAAAGGTATGGGAAAGTGATAACCTTGATATTCTTCGAGTTGAATTAAATAAAAACACGAGGAAGAAAAGATTTTTGTTTGTGTTGGATGATCTGTGGAATGACAATTACAATGATTGGGATGAGCTAGTAAGTCCCCTCATTGAGGGAAAACCTGGAAGTTCAGTGATTATAACAACGCGCCAACAAAAAGTTGCAGATATGGCGAAGACATTTCCTGTTTATAAATTAGACCCTCTGTCACATGAAGACTGTTGGTCTATCCTCTCAAAACATGCATTGGGAAGTCATGAATATCACGCCAATAAAAACACAGCGCTTGAAGAGATTGGTAG 1112 0.3957 MAATMIGGAFLSATVEILLEKLASTEFLDYITNTKLNVSLLRKLQTTLLTLAAVLDDAEERQINNLAVKKWLDDLKDVVLDAEDLVNQISYDSLRCKMENRQAGNRTNQVWNLFSSPFKNLYRDINSQLKIMCETLEPFAQHKDTLGLQTKSARVSRRPPSSSGVNESVMVGRNDDKDTIINMLVSDCGISKNNNLGVVAILGMGGLGKTALAQLVYNSEKVEQHFDFKVWVCVSEDFDVLRVTKSLLESVVRNTTSAASKVWESDNLDILRVELNKNTRKKRFLFVLDDLWNDNYNDWDELVSPLIEGKPGSSVIITTRQQKVADMAKTFPVYKLDPLSHEDCWSILSKHALGSHEYHANKNTALEEIG 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1948 370 PANTHER - 61 370 - -
Psa2g1948 370 Coils Coil 41 61 - -
Psa2g1948 370 Gene3D - 14 132 - -
Psa2g1948 370 Pfam NB-ARC domain 176 356 IPR002182 GO:0043531
Psa2g1948 370 Pfam Rx N-terminal domain 11 103 IPR041118 -
Psa2g1948 370 Gene3D - 159 331 IPR027417 -
Psa2g1948 370 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 356 IPR027417 -
Psa2g1948 370 PRINTS Disease resistance protein signature 198 213 - -
Psa2g1948 370 PRINTS Disease resistance protein signature 278 292 - -
Psa2g1948 370 PANTHER DISEASE RESISTANCE PROTEIN RP 61 370 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g1948 Psa-Chr2 182482832 182484334 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1948 199 339 WRKY Transcription Factor Family AT4G12020 25.828 2.34e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g1948 - - mtr:MTR_3g035840 464.151