Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g1947 AGTTTCTTGATTACATCACAAACACCAAGCTCAATGTCTCCCTCTTGAGAAAGTTACAAACAACCCTGCTCACTCTTGCGGCCGTGCTGGATGATGCAGAAGAGAGGCAGATCAACAATCTTGCTGTCAAAAAATGGCTAGATGACTTGAAAGATGTTGTCTTAGATGCTGAGGATTTGGTCAATCAAATAAGTTATGATTCCCTTCGGTGCAAGATGGAGAATAGACAAGCTGGAAACAGAACTAATCAGGTGTGGAATTTATTTTCATCTCCTTTCAAAAACTTGTATAGAGATATCAATTCCCAACTGAAGATCATGTGTGAAACCCTTGAACCTTTTGCACAACATAAAGATACCCTTGGATTGCAAACAAAAAGCGCAAGAGTTTCTCGAAGACCACCTTCAAGTTCAGGGGTTAATGAATCTGTCATGGTCGGTAGGAACGATGATAAAGATACAATCATCAATATGCTTGTATCAGACTGTGGCATCAGCAAAAATAATAACTTAGGTGTTGTTGCAATTTTGGGTATGGGAGGTCTCGGAAAAACGGCCCTCGCCCAACTGGTTTACAACAGTGAAAAAGTTGAACAACATTTTGATTTCAAAGTCTGGGTTTGTGTATCCGAGGACTTTGATGTTTTGAGAGTAACCAAGTCTCTCCTTGAATCTGTTGTTAGAAATACAACATCCGCAGCTTCAAAGGTATGGGAAAGTGATAACCTTGATATTCTTCGAGTTGAATTAAATAAAAACACGAGGAAGAAAAGATTTTTGATTGTGTTGGATGATCTGTGGAATGACAATTACAATGACTGGGATGAGCTAGTTGCGCGTGTTGTCACTATCAAAACATTGATTTTATTAGATTGCGAGTGTCTCACTGAATTGCCACTCCACATGGAAAACTTAATTAGTTTACGTCACCTTGATATAAGTGGGACTGACATAAAAGAGTTGCCTATGGAAATTGGTGGACTAGAAAACCTCCAAACTTTGACTGTTTTTTTAGTGGGTAAACGACAGGAAGGGTTAAGTATCAAAGAGCTAAGGAAATTCCCAAACCAACAAGGGAAACTTACCATAAAAAACCTATACAATGTCGTTGATGCAAAAGAGGCCGAAGATGCCAACCTGAAAAGCAAAGAGAAAATTGAGAATTTAGAGTTGATATGGGGAAAACAAAGTGAAGATTCAGTAAAAGTGAAAGTTGTGCTTGATATGTTGCAACCACCAATAAACTTGAAGAGCCTTAAAATTGACTTGTATGGTGGGACAAGTTTTCCGAGTTGGTTGGGAAATTCTTTGTTCTCTAACATGGTGTCCCTTGACATTCATAACTGTCAATACTGCATGACACTTCCAGCGCTAGGCCANACAGCCGTGTCTGGAAGAATTTGTTGTCGGTCTGAATGTGGTGACATCTCTGAAAAGGTTCGTCATTTATCATATATTCAAGACGAGTATGATATTTTCACGAAGTTTAGGCCTTTCTACAATTTTAAATGCTTGCGAAGCTTCCTACCCATTACTTTCTGGAGGTCATATAGTTACTTATCTATCAAGGTGGTTGATGATTTGCTACCATTATTCAAAAGGTTGCGCGTGTTGTCACTATCAAAGTATGTAAACATCACCAACCTACCGGATTCAATCGGAAATTTGGTGCAATTGCGGTATCTAGATTTGTCCTTGACTAGAATCAAAAGTTTGCCTGATACAATATGTAACCTTTATAATTTGCAGACATTGATTTTATTAGATTGCGAGTGTCTCACTGAATTGCCACTCCACATGGAAAACTTAATTAGTTTACGTCACCTTGATATAAGTGGGACTGACATAAAAGAGTTGCCTATGGAAATTGGTGGACTAGAAAACCTCCAAACTTTGACTGTTTTTTTAGTGGGTAAACGACAGGAAGGGTTAAGTATCAAAGCGCTAAGGAAATTCCCAAACCAACAAGGGAAACTTACCATAAAAAACCTATACAATGTCGTTGATGCAAAAGAGGCCGAAGATGCCAACCTGAAAAGCAAAGAGAAAATTGAGAATTTAGAGTTGATATGGGGAAAACAAAGTGAAGATTCAGTAAAAGTGAAAGTTGTGCTTGATATGTTGCAACCACCAATAAACTTGAAGAGCCTTAAAATTGACTTGTATGGTGGGACAAGTTTTCCGAGTTGGTTGGGAAATTCTTTGTTCTCTAACATGGTGTCCCTTGACATTCATAACTGTGAATACTGCATGACACTTCCAGCGCTAGGCCAACTACCTTCTCTCAAGAAGCTGAGTATATCGAATTTGTTTTCATTGGAGACAATTGGCTCAGAATTCTATTGTGTTGAAGAAGGAGAATGTTCCAATTCTACCTTCCAACCATTTCCTTCCCTTGAGCATTTGAAATTTCACAACATGCCAAATTTGAAGGATTGGATTCCCTTTGAAAGTATAAATTTTGCATTTCCCCAACTTAGAATTATGAAGTTACATGATTGTCCTGAACTAAGGGGAGATTTGCCTAGCCACCTTTCTTGCTTGGAGGAAATTGAAATAAGAAGTTGTTATAAGCTATTGGAAACACTCCATAGTTTGAATTGGCTATCGGCAATCAAAAAACTAAGAATTGAAGGAGACTTAAGGAGAGAATCTCCCTTGCAACCTGCAGCTGCTGAAAGTTACCCAATGTTTATTTCTAAAATGATCATGAGTAGTATTTCTCTTACTCGTTTGCATCTCTGGAATATTCCGTCTCTCACTGCATTTCCCATAAATGGTCTACCCCATTCACTGCAGTCACTTCATATTTATAGGTGTAGGAATTTGTCCTTCATGCCTTTCGAAACATTTCAAAATTACACATCACTTGTGGATCTTTATATGCGGCATAGCTGTGATTCACTTACATCATTTCCACTTGATGGTTTCCCTGTGCTCCAAGAAATTATCATTTACGGTGGAAGGAGTATGAATTCCATTTTTATTTCAGAAAGTCCTTCACGTATGCAGTCAAGCCTCCGATCACTTCGTATTACATGCAGGGAGTCACTTAAAGTCAATCTTAGGTTGGACACGCTCACCAATCTTGAACATCTGAGTCTTCACTGTCTTGGAAAGTTGTCATTTCATGAAGGAGTTTGTCTGCCCCCCAAATTACAATCAATTAAGATTTCTTTTCGAGGAACAAAGCCGCATGTAAAGGAATGGGGTCTCCAAGACCTAACCGCTCTTTCAGGCTTGAGCATTCAAGAAAAGGGTGAAATGGTTAACAACTTGACAATGGATCTGTTGCTCCCCATCTCCCTTGTGTATCTCACTGTCGGTGATAATCTTTCTTTTGATCTAAATGGGCTTCGACATCTCTCCTCTCTCGAAAATCTCAAATTTCTTTTTTGTGGACATCTCAAGTCTTTGCCAGAAAACTGTCTTCCTTCCTCACTGAAATCACTTGAATTTTATTATTGTGAACAACTAGAGTCATTACCAGAAGACGGACTTCCTACCTCTCTTAATGTACTGACCATCACGGGATGCCCTTTGTTAGAAGAAAGGTATAAAAGGAATGAAAATTGGTCCAAAATTTCTCACATTCCTGTCATAGTTATAACTGAGGAAGTCACAATATGA 3629 0.3863 FLDYITNTKLNVSLLRKLQTTLLTLAAVLDDAEERQINNLAVKKWLDDLKDVVLDAEDLVNQISYDSLRCKMENRQAGNRTNQVWNLFSSPFKNLYRDINSQLKIMCETLEPFAQHKDTLGLQTKSARVSRRPPSSSGVNESVMVGRNDDKDTIINMLVSDCGISKNNNLGVVAILGMGGLGKTALAQLVYNSEKVEQHFDFKVWVCVSEDFDVLRVTKSLLESVVRNTTSAASKVWESDNLDILRVELNKNTRKKRFLIVLDDLWNDNYNDWDELVARVVTIKTLILLDCECLTELPLHMENLISLRHLDISGTDIKELPMEIGGLENLQTLTVFLVGKRQEGLSIKELRKFPNQQGKLTIKNLYNVVDAKEAEDANLKSKEKIENLELIWGKQSEDSVKVKVVLDMLQPPINLKSLKIDLYGGTSFPSWLGNSLFSNMVSLDIHNCQYCMTLPALGXTAVSGRICCRSECGDISEKVRHLSYIQDEYDIFTKFRPFYNFKCLRSFLPITFWRSYSYLSIKVVDDLLPLFKRLRVLSLSKYVNITNLPDSIGNLVQLRYLDLSLTRIKSLPDTICNLYNLQTLILLDCECLTELPLHMENLISLRHLDISGTDIKELPMEIGGLENLQTLTVFLVGKRQEGLSIKALRKFPNQQGKLTIKNLYNVVDAKEAEDANLKSKEKIENLELIWGKQSEDSVKVKVVLDMLQPPINLKSLKIDLYGGTSFPSWLGNSLFSNMVSLDIHNCEYCMTLPALGQLPSLKKLSISNLFSLETIGSEFYCVEEGECSNSTFQPFPSLEHLKFHNMPNLKDWIPFESINFAFPQLRIMKLHDCPELRGDLPSHLSCLEEIEIRSCYKLLETLHSLNWLSAIKKLRIEGDLRRESPLQPAAAESYPMFISKMIMSSISLTRLHLWNIPSLTAFPINGLPHSLQSLHIYRCRNLSFMPFETFQNYTSLVDLYMRHSCDSLTSFPLDGFPVLQEIIIYGGRSMNSIFISESPSRMQSSLRSLRITCRESLKVNLRLDTLTNLEHLSLHCLGKLSFHEGVCLPPKLQSIKISFRGTKPHVKEWGLQDLTALSGLSIQEKGEMVNNLTMDLLLPISLVYLTVGDNLSFDLNGLRHLSSLENLKFLFCGHLKSLPENCLPSSLKSLEFYYCEQLESLPEDGLPTSLNVLTITGCPLLEERYKRNENWSKISHIPVIVITEEVTI* 1209
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Psa2g1947 1208 SUPERFAMILY L domain-like 477 877 - -
Psa2g1947 1208 Pfam Rx N-terminal domain 15 77 IPR041118 -
Psa2g1947 1208 Coils Coil 371 391 - -
Psa2g1947 1208 Coils Coil 669 689 - -
Psa2g1947 1208 Pfam NB-ARC domain 150 277 IPR002182 GO:0043531
Psa2g1947 1208 PRINTS Disease resistance protein signature 172 187 - -
Psa2g1947 1208 PRINTS Disease resistance protein signature 252 266 - -
Psa2g1947 1208 PRINTS Disease resistance protein signature 756 772 - -
Psa2g1947 1208 PANTHER DISEASE RESISTANCE PROTEIN RP 11 276 IPR044974 GO:0006952
Psa2g1947 1208 PANTHER DISEASE RESISTANCE PROTEIN RP 291 460 IPR044974 GO:0006952
Psa2g1947 1208 PANTHER DISEASE RESISTANCE PROTEIN RP 460 944 IPR044974 GO:0006952
Psa2g1947 1208 PANTHER OS05G0414200 PROTEIN 11 276 - -
Psa2g1947 1208 PANTHER OS05G0414200 PROTEIN 460 944 - -
Psa2g1947 1208 PANTHER OS05G0414200 PROTEIN 291 460 - -
Psa2g1947 1208 Coils Coil 15 35 - -
Psa2g1947 1208 Gene3D - 134 283 IPR027417 -
Psa2g1947 1208 Gene3D Ribonuclease Inhibitor 1066 1198 IPR032675 -
Psa2g1947 1208 Gene3D - 13 105 - -
Psa2g1947 1208 Gene3D Ribonuclease Inhibitor 893 1059 IPR032675 -
Psa2g1947 1208 SUPERFAMILY L domain-like 900 1183 - -
Psa2g1947 1208 Gene3D Ribonuclease Inhibitor 510 888 IPR032675 -
Psa2g1947 1208 Gene3D Ribonuclease Inhibitor 284 454 IPR032675 -
Psa2g1947 1208 SUPERFAMILY L domain-like 274 455 - -
Psa2g1947 1208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 281 IPR027417 -
Psa2g1947 1208 SMART LRR_typ_2 602 625 IPR003591 -
Psa2g1947 1208 SMART LRR_typ_2 555 578 IPR003591 -
Psa2g1947 1208 SMART LRR_typ_2 304 327 IPR003591 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Psa2g1947 Psa-Chr2 182478125 182482722 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g1947 545 711 WRKY Transcription Factor Family AT4G12020 33.333 5.61e-10 62.4